Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VMP1Q96GC9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
VMP1Q96GC9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.82■□□□□ 0.76
VMP1Q96GC9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.82■□□□□ 0.76
VMP1Q96GC9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VMP1Q96GC9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
VMP1Q96GC9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.82■□□□□ 0.76
VMP1Q96GC9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VMP1Q96GC9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.82■□□□□ 0.76
VMP1Q96GC9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VMP1Q96GC9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VMP1Q96GC9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
VMP1Q96GC9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VMP1Q96GC9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VMP1Q96GC9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VMP1Q96GC9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VMP1Q96GC9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VMP1Q96GC9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VMP1Q96GC9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VMP1Q96GC9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.81■□□□□ 0.76
VMP1Q96GC9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VMP1Q96GC9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VMP1Q96GC9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
VMP1Q96GC9 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.81■□□□□ 0.76
VMP1Q96GC9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.81■□□□□ 0.76
VMP1Q96GC9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.81■□□□□ 0.76
VMP1Q96GC9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VMP1Q96GC9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.81■□□□□ 0.76
VMP1Q96GC9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.81■□□□□ 0.76
VMP1Q96GC9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VMP1Q96GC9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VMP1Q96GC9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.81■□□□□ 0.76
VMP1Q96GC9 AC007952.6-201ENST00000573168 2673 ntBASIC19.8■□□□□ 0.76
VMP1Q96GC9 AC003957.1-201ENST00000625108 2673 ntBASIC19.8■□□□□ 0.76
VMP1Q96GC9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.8■□□□□ 0.76
VMP1Q96GC9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VMP1Q96GC9 AIRN-201ENST00000601203 4374 ntBASIC19.8■□□□□ 0.76
VMP1Q96GC9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VMP1Q96GC9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VMP1Q96GC9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
VMP1Q96GC9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VMP1Q96GC9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VMP1Q96GC9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
VMP1Q96GC9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VMP1Q96GC9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VMP1Q96GC9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VMP1Q96GC9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.79■□□□□ 0.76
VMP1Q96GC9 AC137761.2-201ENST00000561729 223 ntBASIC19.79■□□□□ 0.76
VMP1Q96GC9 AC145350.3-201ENST00000569033 163 ntBASIC19.79■□□□□ 0.76
VMP1Q96GC9 AL137784.2-201ENST00000607332 1000 ntBASIC19.79■□□□□ 0.76
VMP1Q96GC9 AC104187.1-201ENST00000607510 612 ntBASIC19.79■□□□□ 0.76
VMP1Q96GC9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VMP1Q96GC9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VMP1Q96GC9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VMP1Q96GC9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.79■□□□□ 0.76
VMP1Q96GC9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VMP1Q96GC9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.78■□□□□ 0.76
VMP1Q96GC9 AC010542.4-201ENST00000563151 1910 ntBASIC19.78■□□□□ 0.76
VMP1Q96GC9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VMP1Q96GC9 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VMP1Q96GC9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
VMP1Q96GC9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.78■□□□□ 0.76
VMP1Q96GC9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VMP1Q96GC9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VMP1Q96GC9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VMP1Q96GC9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VMP1Q96GC9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.78■□□□□ 0.76
VMP1Q96GC9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VMP1Q96GC9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VMP1Q96GC9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
VMP1Q96GC9 AC016769.1-201ENST00000409132 1010 ntBASIC19.78■□□□□ 0.76
VMP1Q96GC9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VMP1Q96GC9 IKBKGP1-201ENST00000612193 1073 ntBASIC19.78■□□□□ 0.76
VMP1Q96GC9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VMP1Q96GC9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VMP1Q96GC9 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.78■□□□□ 0.76
VMP1Q96GC9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VMP1Q96GC9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
VMP1Q96GC9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VMP1Q96GC9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VMP1Q96GC9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.77■□□□□ 0.76
VMP1Q96GC9 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.77■□□□□ 0.76
VMP1Q96GC9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.77■□□□□ 0.76
VMP1Q96GC9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.77■□□□□ 0.76
VMP1Q96GC9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VMP1Q96GC9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VMP1Q96GC9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VMP1Q96GC9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
VMP1Q96GC9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VMP1Q96GC9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VMP1Q96GC9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VMP1Q96GC9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VMP1Q96GC9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VMP1Q96GC9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.76■□□□□ 0.75
VMP1Q96GC9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VMP1Q96GC9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VMP1Q96GC9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.76■□□□□ 0.75
VMP1Q96GC9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VMP1Q96GC9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VMP1Q96GC9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms