Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC24.6■■□□□ 1.53
CDCA5Q96FF9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDCA5Q96FF9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CDCA5Q96FF9 AL023875.1-201ENST00000640777 796 ntBASIC24.6■■□□□ 1.53
CDCA5Q96FF9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDCA5Q96FF9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
CDCA5Q96FF9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.6■■□□□ 1.53
CDCA5Q96FF9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.59■■□□□ 1.53
CDCA5Q96FF9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDCA5Q96FF9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDCA5Q96FF9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
CDCA5Q96FF9 AC133681.1-201ENST00000465482 601 ntBASIC24.59■■□□□ 1.53
CDCA5Q96FF9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC24.59■■□□□ 1.53
CDCA5Q96FF9 AC105020.6-201ENST00000621523 1217 ntBASIC24.59■■□□□ 1.53
CDCA5Q96FF9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDCA5Q96FF9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.59■■□□□ 1.53
CDCA5Q96FF9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
CDCA5Q96FF9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDCA5Q96FF9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 RCN1P1-201ENST00000400413 996 ntBASIC24.58■■□□□ 1.53
CDCA5Q96FF9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 TK2-213ENST00000563369 882 ntTSL 5 BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDCA5Q96FF9 C11orf96-202ENST00000528572 1834 ntBASIC24.58■■□□□ 1.53
CDCA5Q96FF9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
CDCA5Q96FF9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
CDCA5Q96FF9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.58■■□□□ 1.52
CDCA5Q96FF9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.58■■□□□ 1.52
CDCA5Q96FF9 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CDCA5Q96FF9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.57■■□□□ 1.52
CDCA5Q96FF9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CDCA5Q96FF9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CDCA5Q96FF9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.57■■□□□ 1.52
CDCA5Q96FF9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
CDCA5Q96FF9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.57■■□□□ 1.52
CDCA5Q96FF9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDCA5Q96FF9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.57■■□□□ 1.52
CDCA5Q96FF9 MIR4785-201ENST00000585005 73 ntBASIC24.57■■□□□ 1.52
CDCA5Q96FF9 AP001412.1-201ENST00000608405 714 ntBASIC24.57■■□□□ 1.52
CDCA5Q96FF9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.57■■□□□ 1.52
CDCA5Q96FF9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.57■■□□□ 1.52
CDCA5Q96FF9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 AC097493.4-201ENST00000641197 219 ntBASIC24.56■■□□□ 1.52
CDCA5Q96FF9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDCA5Q96FF9 AC239809.2-201ENST00000415381 517 ntBASIC24.55■■□□□ 1.52
CDCA5Q96FF9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC24.55■■□□□ 1.52
CDCA5Q96FF9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC24.55■■□□□ 1.52
CDCA5Q96FF9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CDCA5Q96FF9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC24.55■■□□□ 1.52
CDCA5Q96FF9 AC012306.2-201ENST00000609350 630 ntBASIC24.55■■□□□ 1.52
CDCA5Q96FF9 AC113410.3-201ENST00000623366 203 ntBASIC24.55■■□□□ 1.52
CDCA5Q96FF9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDCA5Q96FF9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.55■■□□□ 1.52
CDCA5Q96FF9 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
CDCA5Q96FF9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDCA5Q96FF9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC24.53■■□□□ 1.52
CDCA5Q96FF9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.53■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms