Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 C11orf96-202ENST00000528572 1834 ntBASIC20.01■□□□□ 0.79
RNF31Q96EP0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF31Q96EP0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF31Q96EP0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF31Q96EP0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RNF31Q96EP0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF31Q96EP0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
RNF31Q96EP0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20■□□□□ 0.79
RNF31Q96EP0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
RNF31Q96EP0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF31Q96EP0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF31Q96EP0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF31Q96EP0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF31Q96EP0 FAM99A-202ENST00000538190 1989 ntBASIC20■□□□□ 0.79
RNF31Q96EP0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF31Q96EP0 AL137060.1-201ENST00000618151 2648 ntBASIC20■□□□□ 0.79
RNF31Q96EP0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF31Q96EP0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF31Q96EP0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF31Q96EP0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF31Q96EP0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF31Q96EP0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF31Q96EP0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF31Q96EP0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF31Q96EP0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF31Q96EP0 MIPEPP3-201ENST00000412105 444 ntBASIC19.99■□□□□ 0.79
RNF31Q96EP0 RNA5SP413-201ENST00000516373 109 ntBASIC19.99■□□□□ 0.79
RNF31Q96EP0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF31Q96EP0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RNF31Q96EP0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF31Q96EP0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF31Q96EP0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF31Q96EP0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF31Q96EP0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF31Q96EP0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF31Q96EP0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF31Q96EP0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF31Q96EP0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF31Q96EP0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF31Q96EP0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF31Q96EP0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF31Q96EP0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF31Q96EP0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF31Q96EP0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF31Q96EP0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF31Q96EP0 AC127496.7-201ENST00000625110 1798 ntBASIC19.98■□□□□ 0.79
RNF31Q96EP0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF31Q96EP0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF31Q96EP0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
RNF31Q96EP0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF31Q96EP0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF31Q96EP0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF31Q96EP0 BX276092.2-201ENST00000417668 665 ntBASIC19.97■□□□□ 0.79
RNF31Q96EP0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF31Q96EP0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF31Q96EP0 AC133552.2-202ENST00000575694 574 ntBASIC19.97■□□□□ 0.79
RNF31Q96EP0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF31Q96EP0 AC120498.10-201ENST00000621827 505 ntBASIC19.97■□□□□ 0.79
RNF31Q96EP0 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF31Q96EP0 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.97■□□□□ 0.79
RNF31Q96EP0 TMEM191A-211ENST00000637163 1067 ntBASIC19.97■□□□□ 0.79
RNF31Q96EP0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF31Q96EP0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF31Q96EP0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF31Q96EP0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF31Q96EP0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF31Q96EP0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RNF31Q96EP0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF31Q96EP0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF31Q96EP0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF31Q96EP0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RNF31Q96EP0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RNF31Q96EP0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF31Q96EP0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RNF31Q96EP0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF31Q96EP0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF31Q96EP0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RNF31Q96EP0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF31Q96EP0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF31Q96EP0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF31Q96EP0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF31Q96EP0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF31Q96EP0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF31Q96EP0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF31Q96EP0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF31Q96EP0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF31Q96EP0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF31Q96EP0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF31Q96EP0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF31Q96EP0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF31Q96EP0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF31Q96EP0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF31Q96EP0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF31Q96EP0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF31Q96EP0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF31Q96EP0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms