Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 REXO1L12P-201ENST00000622156 912 ntBASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNRNP40Q96DI7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.77■□□□□ 0.59
SNRNP40Q96DI7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNRNP40Q96DI7 AC092053.2-201ENST00000640557 1818 ntBASIC18.77■□□□□ 0.59
SNRNP40Q96DI7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 AC069544.1-201ENST00000609399 999 ntBASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 C11orf96-202ENST00000528572 1834 ntBASIC18.76■□□□□ 0.59
SNRNP40Q96DI7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 AC211429.1-201ENST00000415277 523 ntBASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SNRNP40Q96DI7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 AC007322.3-201ENST00000426526 701 ntBASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNRNP40Q96DI7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNRNP40Q96DI7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 MIR1224-201ENST00000408193 85 ntBASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 POM121L13P-201ENST00000422362 380 ntBASIC18.72■□□□□ 0.59
SNRNP40Q96DI7 FAM210CP-201ENST00000445714 574 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms