Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 TERF1P5-201ENST00000477545 1207 ntBASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTHRC1Q96CG8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CTHRC1Q96CG8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 DUX4L16-201ENST00000555130 1264 ntBASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 IKBKGP1-201ENST00000612193 1073 ntBASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTHRC1Q96CG8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 AC116050.2-201ENST00000612102 1779 ntBASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 AC007322.4-201ENST00000509611 723 ntBASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 AC011767.1-201ENST00000617410 1153 ntBASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTHRC1Q96CG8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 AC006128.1-201ENST00000624704 1661 ntBASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 BID-214ENST00000617586 542 ntTSL 5 BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTHRC1Q96CG8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms