Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP7Q93009 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP7Q93009 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.5■□□□□ 0.87
USP7Q93009 AP001160.3-201ENST00000601484 763 ntBASIC20.5■□□□□ 0.87
USP7Q93009 AC005181.1-201ENST00000604782 1256 ntBASIC20.5■□□□□ 0.87
USP7Q93009 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP7Q93009 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP7Q93009 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP7Q93009 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP7Q93009 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.5■□□□□ 0.87
USP7Q93009 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.5■□□□□ 0.87
USP7Q93009 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.5■□□□□ 0.87
USP7Q93009 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.5■□□□□ 0.87
USP7Q93009 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP7Q93009 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
USP7Q93009 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.49■□□□□ 0.87
USP7Q93009 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP7Q93009 CD99P1-205ENST00000527459 561 ntBASIC20.49■□□□□ 0.87
USP7Q93009 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.49■□□□□ 0.87
USP7Q93009 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
USP7Q93009 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP7Q93009 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.49■□□□□ 0.87
USP7Q93009 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP7Q93009 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.48■□□□□ 0.87
USP7Q93009 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.48■□□□□ 0.87
USP7Q93009 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP7Q93009 TSPY6P-201ENST00000448518 926 ntBASIC20.48■□□□□ 0.87
USP7Q93009 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP7Q93009 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
USP7Q93009 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.48■□□□□ 0.87
USP7Q93009 AC142086.2-201ENST00000569753 217 ntBASIC20.48■□□□□ 0.87
USP7Q93009 TMEM191A-211ENST00000637163 1067 ntBASIC20.48■□□□□ 0.87
USP7Q93009 MYCNOS-205ENST00000641950 531 ntBASIC20.48■□□□□ 0.87
USP7Q93009 AF106564.1-201ENST00000607058 2553 ntBASIC20.48■□□□□ 0.87
USP7Q93009 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
USP7Q93009 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.48■□□□□ 0.87
USP7Q93009 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.48■□□□□ 0.87
USP7Q93009 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP7Q93009 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP7Q93009 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP7Q93009 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP7Q93009 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP7Q93009 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP7Q93009 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.47■□□□□ 0.87
USP7Q93009 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.47■□□□□ 0.87
USP7Q93009 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
USP7Q93009 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.47■□□□□ 0.87
USP7Q93009 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP7Q93009 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP7Q93009 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP7Q93009 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP7Q93009 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.47■□□□□ 0.87
USP7Q93009 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.46■□□□□ 0.87
USP7Q93009 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.46■□□□□ 0.87
USP7Q93009 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP7Q93009 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
USP7Q93009 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP7Q93009 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP7Q93009 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.46■□□□□ 0.87
USP7Q93009 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.46■□□□□ 0.87
USP7Q93009 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP7Q93009 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP7Q93009 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
USP7Q93009 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP7Q93009 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP7Q93009 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP7Q93009 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP7Q93009 AL024507.2-201ENST00000606070 2574 ntBASIC20.45■□□□□ 0.86
USP7Q93009 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP7Q93009 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP7Q93009 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP7Q93009 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.45■□□□□ 0.86
USP7Q93009 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP7Q93009 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.45■□□□□ 0.86
USP7Q93009 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP7Q93009 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
USP7Q93009 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.45■□□□□ 0.86
USP7Q93009 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
USP7Q93009 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP7Q93009 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.45■□□□□ 0.86
USP7Q93009 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP7Q93009 AC055733.4-201ENST00000638462 1354 ntBASIC20.45■□□□□ 0.86
USP7Q93009 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
USP7Q93009 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
USP7Q93009 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP7Q93009 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.44■□□□□ 0.86
USP7Q93009 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP7Q93009 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.44■□□□□ 0.86
USP7Q93009 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP7Q93009 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP7Q93009 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP7Q93009 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.44■□□□□ 0.86
USP7Q93009 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.44■□□□□ 0.86
USP7Q93009 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.44■□□□□ 0.86
USP7Q93009 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.44■□□□□ 0.86
USP7Q93009 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.44■□□□□ 0.86
USP7Q93009 SLC7A5P2-201ENST00000553010 536 ntBASIC20.44■□□□□ 0.86
USP7Q93009 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.44■□□□□ 0.86
USP7Q93009 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
USP7Q93009 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms