Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40AQ8WXH6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RAB40AQ8WXH6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 AC026271.2-201ENST00000428091 497 ntBASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 AC068587.7-201ENST00000641602 218 ntBASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB40AQ8WXH6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40AQ8WXH6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 AC073314.1-201ENST00000568729 2216 ntBASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40AQ8WXH6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 MIR572-201ENST00000384983 95 ntBASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 MIR5787-201ENST00000611784 55 ntBASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 MIR6821-201ENST00000617625 74 ntBASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40AQ8WXH6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms