Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 SLC25A24-204ENST00000569674 2357 ntBASIC21.02■□□□□ 0.96
PTCD2Q8WV60 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PTCD2Q8WV60 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PTCD2Q8WV60 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTCD2Q8WV60 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PTCD2Q8WV60 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.01■□□□□ 0.95
PTCD2Q8WV60 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTCD2Q8WV60 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.01■□□□□ 0.95
PTCD2Q8WV60 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.01■□□□□ 0.95
PTCD2Q8WV60 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PTCD2Q8WV60 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PTCD2Q8WV60 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTCD2Q8WV60 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21■□□□□ 0.95
PTCD2Q8WV60 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCD2Q8WV60 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCD2Q8WV60 POU5F1P4-201ENST00000413175 1085 ntBASIC21■□□□□ 0.95
PTCD2Q8WV60 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21■□□□□ 0.95
PTCD2Q8WV60 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTCD2Q8WV60 AC080038.1-201ENST00000611274 1154 ntBASIC21■□□□□ 0.95
PTCD2Q8WV60 AC011767.1-201ENST00000617410 1153 ntBASIC21■□□□□ 0.95
PTCD2Q8WV60 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCD2Q8WV60 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCD2Q8WV60 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21■□□□□ 0.95
PTCD2Q8WV60 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTCD2Q8WV60 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21■□□□□ 0.95
PTCD2Q8WV60 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 AC008175.2-201ENST00000612840 297 ntBASIC20.99■□□□□ 0.95
PTCD2Q8WV60 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.99■□□□□ 0.95
PTCD2Q8WV60 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 AP001160.3-201ENST00000601484 763 ntBASIC20.98■□□□□ 0.95
PTCD2Q8WV60 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTCD2Q8WV60 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 CDCA4P2-201ENST00000441182 718 ntBASIC20.97■□□□□ 0.95
PTCD2Q8WV60 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 AC138907.5-202ENST00000569484 235 ntBASIC20.97■□□□□ 0.95
PTCD2Q8WV60 UBE2DNL-204ENST00000602536 740 ntBASIC20.97■□□□□ 0.95
PTCD2Q8WV60 RAP2CP1-201ENST00000605103 478 ntBASIC20.97■□□□□ 0.95
PTCD2Q8WV60 AC073111.5-205ENST00000641717 521 ntBASIC20.97■□□□□ 0.95
PTCD2Q8WV60 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.97■□□□□ 0.95
PTCD2Q8WV60 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTCD2Q8WV60 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCD2Q8WV60 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCD2Q8WV60 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PTCD2Q8WV60 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCD2Q8WV60 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.96■□□□□ 0.95
PTCD2Q8WV60 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCD2Q8WV60 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCD2Q8WV60 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTCD2Q8WV60 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.96■□□□□ 0.95
PTCD2Q8WV60 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.96■□□□□ 0.95
PTCD2Q8WV60 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms