Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SH3RF2Q8TEC5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SH3RF2Q8TEC5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SH3RF2Q8TEC5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 FAM201B-201ENST00000458407 597 ntBASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 AC083880.1-201ENST00000608266 535 ntBASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SH3RF2Q8TEC5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 AC097658.1-201ENST00000475555 843 ntBASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 MYC-209ENST00000641252 345 ntBASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SH3RF2Q8TEC5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 CLDN5-201ENST00000403084 2357 ntBASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 CDV3P1-201ENST00000471403 739 ntBASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 AC091874.3-201ENST00000512672 1195 ntBASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 FAM21FP-204ENST00000608637 956 ntBASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SH3RF2Q8TEC5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SH3RF2Q8TEC5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SH3RF2Q8TEC5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SH3RF2Q8TEC5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SH3RF2Q8TEC5 DUSP5P2-201ENST00000426873 1033 ntBASIC21.58■■□□□ 1.05
SH3RF2Q8TEC5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.58■■□□□ 1.05
SH3RF2Q8TEC5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.58■■□□□ 1.05
SH3RF2Q8TEC5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SH3RF2Q8TEC5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.58■■□□□ 1.05
SH3RF2Q8TEC5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.58■■□□□ 1.04
SH3RF2Q8TEC5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.58■■□□□ 1.04
SH3RF2Q8TEC5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SH3RF2Q8TEC5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SH3RF2Q8TEC5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
SH3RF2Q8TEC5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms