Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH19Q8TAB3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH19Q8TAB3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDH19Q8TAB3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDH19Q8TAB3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 NTF6G-201ENST00000591094 616 ntBASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 AL137784.2-201ENST00000607332 1000 ntBASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
PCDH19Q8TAB3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 AL157384.1-201ENST00000445995 2473 ntBASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 AC120498.10-201ENST00000621827 505 ntBASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 AC092437.1-201ENST00000624794 1048 ntBASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH19Q8TAB3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 KRT18P20-201ENST00000548986 1279 ntBASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH19Q8TAB3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH19Q8TAB3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms