Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDND2Q8NHS1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 TERF1P5-201ENST00000477545 1207 ntBASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 AC120498.10-201ENST00000621827 505 ntBASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CLDND2Q8NHS1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 SLC29A4P1-201ENST00000398760 971 ntBASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 GUSBP6-202ENST00000438529 1198 ntBASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 AC142086.2-201ENST00000569753 217 ntBASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLDND2Q8NHS1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 AF201337.1-201ENST00000520239 748 ntBASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDND2Q8NHS1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 POU5F1P4-201ENST00000413175 1085 ntBASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 AC105036.2-201ENST00000569468 176 ntBASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDND2Q8NHS1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDND2Q8NHS1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms