Protein–RNA interactions for Protein: Q8NDX2

SLC17A8, Vesicular glutamate transporter 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC17A8Q8NDX2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
SLC17A8Q8NDX2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.37■■□□□ 1.33
SLC17A8Q8NDX2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SLC17A8Q8NDX2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SLC17A8Q8NDX2 AC244015.2-201ENST00000616358 1861 ntBASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 MIPEPP3-201ENST00000412105 444 ntBASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SLC17A8Q8NDX2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 SNORA78-201ENST00000459373 127 ntBASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 PRKY-204ENST00000533551 1019 ntBASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SLC17A8Q8NDX2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
SLC17A8Q8NDX2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
SLC17A8Q8NDX2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC17A8Q8NDX2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC17A8Q8NDX2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SLC17A8Q8NDX2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC17A8Q8NDX2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.32■■□□□ 1.32
SLC17A8Q8NDX2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.32■■□□□ 1.32
SLC17A8Q8NDX2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC17A8Q8NDX2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
SLC17A8Q8NDX2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.32■■□□□ 1.32
SLC17A8Q8NDX2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC17A8Q8NDX2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC17A8Q8NDX2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC17A8Q8NDX2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC17A8Q8NDX2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SLC17A8Q8NDX2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SLC17A8Q8NDX2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms