Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RETREG2Q8NC44 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RETREG2Q8NC44 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RETREG2Q8NC44 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RETREG2Q8NC44 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RETREG2Q8NC44 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.53■■□□□ 1.36
RETREG2Q8NC44 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.53■■□□□ 1.36
RETREG2Q8NC44 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.53■■□□□ 1.36
RETREG2Q8NC44 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RETREG2Q8NC44 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RETREG2Q8NC44 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.53■■□□□ 1.36
RETREG2Q8NC44 KRT18P29-201ENST00000397031 1267 ntBASIC23.53■■□□□ 1.36
RETREG2Q8NC44 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 CYP2T1P-201ENST00000432607 1285 ntBASIC23.52■■□□□ 1.36
RETREG2Q8NC44 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 OR10C1-204ENST00000622521 1039 ntBASIC23.52■■□□□ 1.36
RETREG2Q8NC44 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
RETREG2Q8NC44 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 AC093827.2-201ENST00000512654 315 ntBASIC23.51■■□□□ 1.35
RETREG2Q8NC44 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 AC008687.6-201ENST00000596318 630 ntBASIC23.51■■□□□ 1.35
RETREG2Q8NC44 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
RETREG2Q8NC44 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.5■■□□□ 1.35
RETREG2Q8NC44 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 ITM2C-210ENST00000620962 501 ntBASIC23.5■■□□□ 1.35
RETREG2Q8NC44 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RETREG2Q8NC44 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.49■■□□□ 1.35
RETREG2Q8NC44 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 AC007322.4-201ENST00000509611 723 ntBASIC23.49■■□□□ 1.35
RETREG2Q8NC44 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 AC069236.1-201ENST00000604339 616 ntBASIC23.49■■□□□ 1.35
RETREG2Q8NC44 AC008175.2-201ENST00000612840 297 ntBASIC23.49■■□□□ 1.35
RETREG2Q8NC44 AC120498.10-201ENST00000621827 505 ntBASIC23.49■■□□□ 1.35
RETREG2Q8NC44 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
RETREG2Q8NC44 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
RETREG2Q8NC44 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms