Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 MIR4758-201ENST00000577688 71 ntBASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.51■■□□□ 1.03
PHTF2Q8N3S3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 AL162412.1-201ENST00000567129 965 ntBASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 AC069236.1-201ENST00000604339 616 ntBASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHTF2Q8N3S3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 AC092118.2-201ENST00000613495 667 ntBASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHTF2Q8N3S3 AC026310.3-201ENST00000625186 2373 ntBASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PHTF2Q8N3S3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 AC026471.6-201ENST00000622954 1905 ntBASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 AL591742.1-201ENST00000604433 565 ntBASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 AC008694.1-202ENST00000636953 945 ntBASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.47■■□□□ 1.03
PHTF2Q8N3S3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PHTF2Q8N3S3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHTF2Q8N3S3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHTF2Q8N3S3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.46■■□□□ 1.03
PHTF2Q8N3S3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.46■■□□□ 1.03
PHTF2Q8N3S3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.46■■□□□ 1.03
PHTF2Q8N3S3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.46■■□□□ 1.03
PHTF2Q8N3S3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHTF2Q8N3S3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHTF2Q8N3S3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PHTF2Q8N3S3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.46■■□□□ 1.03
PHTF2Q8N3S3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.45■■□□□ 1.02
PHTF2Q8N3S3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PHTF2Q8N3S3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms