Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIX5Q8N196 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIX5Q8N196 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SIX5Q8N196 RPS2P55-201ENST00000397318 883 ntBASIC21.32■■□□□ 1
SIX5Q8N196 AC107956.1-201ENST00000494359 873 ntBASIC21.32■■□□□ 1
SIX5Q8N196 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.32■■□□□ 1
SIX5Q8N196 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.32■■□□□ 1
SIX5Q8N196 AC233702.5-201ENST00000584107 538 ntBASIC21.32■■□□□ 1
SIX5Q8N196 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.32■■□□□ 1
SIX5Q8N196 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.32■■□□□ 1
SIX5Q8N196 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.32■■□□□ 1
SIX5Q8N196 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SIX5Q8N196 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.31■■□□□ 1
SIX5Q8N196 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SIX5Q8N196 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
SIX5Q8N196 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SIX5Q8N196 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.31■■□□□ 1
SIX5Q8N196 KRT18P68-201ENST00000392293 1000 ntBASIC21.31■■□□□ 1
SIX5Q8N196 POM121L13P-201ENST00000422362 380 ntBASIC21.31■■□□□ 1
SIX5Q8N196 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.31■■□□□ 1
SIX5Q8N196 AC133561.5-201ENST00000635547 218 ntBASIC21.31■■□□□ 1
SIX5Q8N196 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.31■■□□□ 1
SIX5Q8N196 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SIX5Q8N196 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.31■■□□□ 1
SIX5Q8N196 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.31■■□□□ 1
SIX5Q8N196 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SIX5Q8N196 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
SIX5Q8N196 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SIX5Q8N196 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.3■■□□□ 1
SIX5Q8N196 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.3■■□□□ 1
SIX5Q8N196 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.3■■□□□ 1
SIX5Q8N196 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.3■■□□□ 1
SIX5Q8N196 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SIX5Q8N196 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SIX5Q8N196 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.3■■□□□ 1
SIX5Q8N196 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.3■■□□□ 1
SIX5Q8N196 AC137767.1-201ENST00000602918 1920 ntBASIC21.3■■□□□ 1
SIX5Q8N196 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SIX5Q8N196 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.3■■□□□ 1
SIX5Q8N196 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
SIX5Q8N196 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SIX5Q8N196 AC245052.3-201ENST00000450182 901 ntBASIC21.3■■□□□ 1
SIX5Q8N196 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.3■■□□□ 1
SIX5Q8N196 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.3■■□□□ 1
SIX5Q8N196 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.3■■□□□ 1
SIX5Q8N196 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.3■■□□□ 1
SIX5Q8N196 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.3■■□□□ 1
SIX5Q8N196 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SIX5Q8N196 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SIX5Q8N196 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.29■■□□□ 1
SIX5Q8N196 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SIX5Q8N196 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.29■■□□□ 1
SIX5Q8N196 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.29■■□□□ 1
SIX5Q8N196 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.29■■□□□ 1
SIX5Q8N196 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.29■■□□□ 1
SIX5Q8N196 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIX5Q8N196 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIX5Q8N196 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.29■■□□□ 1
SIX5Q8N196 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIX5Q8N196 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.29■■□□□ 1
SIX5Q8N196 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
SIX5Q8N196 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIX5Q8N196 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.29■■□□□ 1
SIX5Q8N196 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SIX5Q8N196 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SIX5Q8N196 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SIX5Q8N196 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
SIX5Q8N196 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SIX5Q8N196 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
SIX5Q8N196 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.29■■□□□ 1
SIX5Q8N196 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SIX5Q8N196 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIX5Q8N196 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.28■■□□□ 1
SIX5Q8N196 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SIX5Q8N196 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.28■■□□□ 1
SIX5Q8N196 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.28■■□□□ 1
SIX5Q8N196 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.28■■□□□ 1
SIX5Q8N196 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SIX5Q8N196 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SIX5Q8N196 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.28■■□□□ 1
SIX5Q8N196 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.28■■□□□ 1
SIX5Q8N196 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.28■■□□□ 1
SIX5Q8N196 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.28■■□□□ 1
SIX5Q8N196 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.28■■□□□ 1
SIX5Q8N196 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.28■■□□□ 1
SIX5Q8N196 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.28■■□□□ 1
SIX5Q8N196 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.28■■□□□ 1
SIX5Q8N196 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIX5Q8N196 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIX5Q8N196 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIX5Q8N196 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIX5Q8N196 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
SIX5Q8N196 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIX5Q8N196 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.27■■□□□ 1
SIX5Q8N196 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.27■■□□□ 1
SIX5Q8N196 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SIX5Q8N196 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.27■■□□□ 1
SIX5Q8N196 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.27■■□□□ 1
SIX5Q8N196 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIX5Q8N196 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms