Protein–RNA interactions for Protein: Q8IYA2

CCDC144CP, Putative coiled-coil domain-containing protein 144C, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CPQ8IYA2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC144CPQ8IYA2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC144CPQ8IYA2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC144CPQ8IYA2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.53■■□□□ 1.52
CCDC144CPQ8IYA2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.53■■□□□ 1.52
CCDC144CPQ8IYA2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CCDC144CPQ8IYA2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC144CPQ8IYA2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC144CPQ8IYA2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC144CPQ8IYA2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.53■■□□□ 1.52
CCDC144CPQ8IYA2 FEM1AP4-201ENST00000443167 1987 ntBASIC24.53■■□□□ 1.52
CCDC144CPQ8IYA2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CCDC144CPQ8IYA2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC144CPQ8IYA2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC144CPQ8IYA2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC144CPQ8IYA2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.52■■□□□ 1.52
CCDC144CPQ8IYA2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC144CPQ8IYA2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.52■■□□□ 1.52
CCDC144CPQ8IYA2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.52■■□□□ 1.52
CCDC144CPQ8IYA2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 AL355802.2-201ENST00000402069 882 ntBASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.51■■□□□ 1.51
CCDC144CPQ8IYA2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
CCDC144CPQ8IYA2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC144CPQ8IYA2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
CCDC144CPQ8IYA2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC144CPQ8IYA2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC144CPQ8IYA2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC144CPQ8IYA2 UBE2DNL-204ENST00000602536 740 ntBASIC24.49■■□□□ 1.51
CCDC144CPQ8IYA2 AC008175.2-201ENST00000612840 297 ntBASIC24.49■■□□□ 1.51
CCDC144CPQ8IYA2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC144CPQ8IYA2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC144CPQ8IYA2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC144CPQ8IYA2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCDC144CPQ8IYA2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144CPQ8IYA2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144CPQ8IYA2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
CCDC144CPQ8IYA2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.48■■□□□ 1.51
CCDC144CPQ8IYA2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144CPQ8IYA2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC144CPQ8IYA2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
CCDC144CPQ8IYA2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.48■■□□□ 1.51
CCDC144CPQ8IYA2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.48■■□□□ 1.51
CCDC144CPQ8IYA2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 GPX1P1-201ENST00000388829 606 ntBASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC144CPQ8IYA2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.46■■□□□ 1.51
CCDC144CPQ8IYA2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC144CPQ8IYA2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC144CPQ8IYA2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
CCDC144CPQ8IYA2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.46■■□□□ 1.51
CCDC144CPQ8IYA2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.46■■□□□ 1.51
CCDC144CPQ8IYA2 AL050303.2-201ENST00000619798 666 ntBASIC24.46■■□□□ 1.51
CCDC144CPQ8IYA2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms