Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 AC010331.1-201ENST00000611423 582 ntBASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 AC243732.1-201ENST00000612648 864 ntBASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 AC093323.1-202ENST00000635031 2045 ntBASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.81■□□□□ 0.6
RP1L1Q8IWN7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 KRT17P3-201ENST00000420566 1262 ntBASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 AL049637.2-201ENST00000641778 930 ntBASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 AC100791.3-201ENST00000617619 330 ntBASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 AC097493.4-201ENST00000641197 219 ntBASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RP1L1Q8IWN7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 AC233263.1-201ENST00000578059 224 ntBASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.79■□□□□ 0.6
RP1L1Q8IWN7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 SOX15-203ENST00000570788 1093 ntBASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 AC060766.5-201ENST00000590539 871 ntBASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 AP001412.1-201ENST00000608405 714 ntBASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.78■□□□□ 0.6
RP1L1Q8IWN7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RP1L1Q8IWN7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.77■□□□□ 0.59
RP1L1Q8IWN7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.77■□□□□ 0.59
RP1L1Q8IWN7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.77■□□□□ 0.59
RP1L1Q8IWN7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.77■□□□□ 0.59
RP1L1Q8IWN7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RP1L1Q8IWN7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RP1L1Q8IWN7 AC003102.1-202ENST00000563394 1796 ntBASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RP1L1Q8IWN7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms