Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 AC074183.2-201ENST00000623112 922 ntBASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LYSMD2Q8IV50 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
LYSMD2Q8IV50 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LYSMD2Q8IV50 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 AC005703.6-201ENST00000623265 1329 ntBASIC18.22■□□□□ 0.51
LYSMD2Q8IV50 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 AC007225.1-201ENST00000566331 1836 ntBASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LYSMD2Q8IV50 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms