Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 KRT87P-202ENST00000534226 1464 ntBASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE8Q86YQ8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE8Q86YQ8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 KRT18P61-201ENST00000585825 1298 ntBASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 PCDHAC2-203ENST00000615316 3011 ntBASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CPNE8Q86YQ8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CPNE8Q86YQ8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
CPNE8Q86YQ8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.77■■□□□ 1.07
CPNE8Q86YQ8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CPNE8Q86YQ8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE8Q86YQ8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.76■■□□□ 1.07
CPNE8Q86YQ8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE8Q86YQ8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE8Q86YQ8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE8Q86YQ8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE8Q86YQ8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE8Q86YQ8 AP004607.4-201ENST00000530158 1459 ntBASIC21.76■■□□□ 1.07
CPNE8Q86YQ8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE8Q86YQ8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE8Q86YQ8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 AC007225.1-201ENST00000566331 1836 ntBASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE8Q86YQ8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 SLC7A5P2-201ENST00000553010 536 ntBASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 AC104187.1-201ENST00000607510 612 ntBASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 RARRES2P11-201ENST00000635158 484 ntBASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE8Q86YQ8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.73■■□□□ 1.07
CPNE8Q86YQ8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms