Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 KRT87P-202ENST00000534226 1464 ntBASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.67■□□□□ 0.9
ZC3HC1Q86WB0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 AC105265.2-201ENST00000467189 838 ntBASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.66■□□□□ 0.9
ZC3HC1Q86WB0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 IRS3P-201ENST00000223076 1006 ntBASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 AC011484.1-201ENST00000377652 1995 ntBASIC20.65■□□□□ 0.9
ZC3HC1Q86WB0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ZC3HC1Q86WB0 AC027702.1-201ENST00000563810 1770 ntBASIC20.64■□□□□ 0.9
ZC3HC1Q86WB0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZC3HC1Q86WB0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.64■□□□□ 0.9
ZC3HC1Q86WB0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 POU5F1P4-201ENST00000413175 1085 ntBASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 AC027612.3-201ENST00000413684 1047 ntBASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZC3HC1Q86WB0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 AC008175.2-201ENST00000612840 297 ntBASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZC3HC1Q86WB0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 AC138907.5-202ENST00000569484 235 ntBASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ZC3HC1Q86WB0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.61■□□□□ 0.89
ZC3HC1Q86WB0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.61■□□□□ 0.89
ZC3HC1Q86WB0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
ZC3HC1Q86WB0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.61■□□□□ 0.89
ZC3HC1Q86WB0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3HC1Q86WB0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZC3HC1Q86WB0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms