Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.6■■□□□ 1.05
DENND4AQ7Z401 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DENND4AQ7Z401 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DENND4AQ7Z401 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DENND4AQ7Z401 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.6■■□□□ 1.05
DENND4AQ7Z401 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
DENND4AQ7Z401 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.6■■□□□ 1.05
DENND4AQ7Z401 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DENND4AQ7Z401 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
DENND4AQ7Z401 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
DENND4AQ7Z401 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.59■■□□□ 1.05
DENND4AQ7Z401 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.59■■□□□ 1.05
DENND4AQ7Z401 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DENND4AQ7Z401 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.59■■□□□ 1.05
DENND4AQ7Z401 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DENND4AQ7Z401 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.59■■□□□ 1.05
DENND4AQ7Z401 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DENND4AQ7Z401 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.58■■□□□ 1.05
DENND4AQ7Z401 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DENND4AQ7Z401 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DENND4AQ7Z401 AL355075.4-201ENST00000554988 638 ntBASIC21.58■■□□□ 1.05
DENND4AQ7Z401 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
DENND4AQ7Z401 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.58■■□□□ 1.05
DENND4AQ7Z401 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DENND4AQ7Z401 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
DENND4AQ7Z401 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.58■■□□□ 1.05
DENND4AQ7Z401 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
DENND4AQ7Z401 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
DENND4AQ7Z401 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
DENND4AQ7Z401 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.58■■□□□ 1.04
DENND4AQ7Z401 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
DENND4AQ7Z401 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
DENND4AQ7Z401 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
DENND4AQ7Z401 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
DENND4AQ7Z401 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.58■■□□□ 1.04
DENND4AQ7Z401 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 CYP21A1P-202ENST00000354927 1481 ntBASIC21.57■■□□□ 1.04
DENND4AQ7Z401 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.57■■□□□ 1.04
DENND4AQ7Z401 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 RN7SL471P-201ENST00000580476 299 ntBASIC21.56■■□□□ 1.04
DENND4AQ7Z401 AC124016.1-201ENST00000609552 612 ntBASIC21.56■■□□□ 1.04
DENND4AQ7Z401 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 AC010331.1-201ENST00000611423 582 ntBASIC21.56■■□□□ 1.04
DENND4AQ7Z401 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DENND4AQ7Z401 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DENND4AQ7Z401 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DENND4AQ7Z401 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
DENND4AQ7Z401 MIR1224-201ENST00000408193 85 ntBASIC21.55■■□□□ 1.04
DENND4AQ7Z401 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DENND4AQ7Z401 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.55■■□□□ 1.04
DENND4AQ7Z401 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DENND4AQ7Z401 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
DENND4AQ7Z401 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
DENND4AQ7Z401 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 AC133681.1-201ENST00000465482 601 ntBASIC21.54■■□□□ 1.04
DENND4AQ7Z401 AC233702.5-201ENST00000584107 538 ntBASIC21.54■■□□□ 1.04
DENND4AQ7Z401 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DENND4AQ7Z401 AC026471.6-201ENST00000622954 1905 ntBASIC21.54■■□□□ 1.04
DENND4AQ7Z401 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms