Protein–RNA interactions for Protein: Q717R9

CYS1, Cystin-1, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYS1Q717R9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CYS1Q717R9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.78■□□□□ 0.92
CYS1Q717R9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CYS1Q717R9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.78■□□□□ 0.92
CYS1Q717R9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.78■□□□□ 0.92
CYS1Q717R9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.78■□□□□ 0.92
CYS1Q717R9 AF213884.3-201ENST00000563833 479 ntBASIC20.78■□□□□ 0.92
CYS1Q717R9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.78■□□□□ 0.92
CYS1Q717R9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYS1Q717R9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.78■□□□□ 0.92
CYS1Q717R9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CYS1Q717R9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.77■□□□□ 0.92
CYS1Q717R9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CYS1Q717R9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CYS1Q717R9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.77■□□□□ 0.92
CYS1Q717R9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.77■□□□□ 0.92
CYS1Q717R9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.77■□□□□ 0.92
CYS1Q717R9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CYS1Q717R9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYS1Q717R9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.77■□□□□ 0.92
CYS1Q717R9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CYS1Q717R9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYS1Q717R9 AC110285.6-201ENST00000617652 491 ntBASIC20.77■□□□□ 0.92
CYS1Q717R9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CYS1Q717R9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.77■□□□□ 0.92
CYS1Q717R9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYS1Q717R9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CYS1Q717R9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYS1Q717R9 FP700111.2-201ENST00000619190 1892 ntBASIC20.77■□□□□ 0.92
CYS1Q717R9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CYS1Q717R9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CYS1Q717R9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CYS1Q717R9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CYS1Q717R9 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 SUDS3P1-201ENST00000505831 966 ntBASIC20.76■□□□□ 0.91
CYS1Q717R9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.76■□□□□ 0.91
CYS1Q717R9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CYS1Q717R9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYS1Q717R9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.76■□□□□ 0.91
CYS1Q717R9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CYS1Q717R9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYS1Q717R9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYS1Q717R9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYS1Q717R9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CYS1Q717R9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYS1Q717R9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYS1Q717R9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.75■□□□□ 0.91
CYS1Q717R9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.75■□□□□ 0.91
CYS1Q717R9 AC008175.2-201ENST00000612840 297 ntBASIC20.75■□□□□ 0.91
CYS1Q717R9 AL358852.1-201ENST00000623174 1268 ntBASIC20.75■□□□□ 0.91
CYS1Q717R9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYS1Q717R9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CYS1Q717R9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYS1Q717R9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.75■□□□□ 0.91
CYS1Q717R9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYS1Q717R9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
CYS1Q717R9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYS1Q717R9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYS1Q717R9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYS1Q717R9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CYS1Q717R9 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.74■□□□□ 0.91
CYS1Q717R9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CYS1Q717R9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYS1Q717R9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYS1Q717R9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.74■□□□□ 0.91
CYS1Q717R9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYS1Q717R9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.74■□□□□ 0.91
CYS1Q717R9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.74■□□□□ 0.91
CYS1Q717R9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CYS1Q717R9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CYS1Q717R9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYS1Q717R9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYS1Q717R9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYS1Q717R9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.73■□□□□ 0.91
CYS1Q717R9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CYS1Q717R9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CYS1Q717R9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms