Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
FOXR2Q6PJQ5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.69■■□□□ 1.22
FOXR2Q6PJQ5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
FOXR2Q6PJQ5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
FOXR2Q6PJQ5 LINC01006-201ENST00000333319 2292 ntBASIC22.69■■□□□ 1.22
FOXR2Q6PJQ5 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
FOXR2Q6PJQ5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 KRT18P14-201ENST00000534205 1250 ntBASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 AC027702.1-201ENST00000563810 1770 ntBASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FOXR2Q6PJQ5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
FOXR2Q6PJQ5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.66■■□□□ 1.22
FOXR2Q6PJQ5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 AC020907.5-201ENST00000624372 1936 ntBASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 SLC7A5P2-201ENST00000553010 536 ntBASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
FOXR2Q6PJQ5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
FOXR2Q6PJQ5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
FOXR2Q6PJQ5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.64■■□□□ 1.22
FOXR2Q6PJQ5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 ZNRF2P3-201ENST00000424200 374 ntBASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.64■■□□□ 1.21
FOXR2Q6PJQ5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FOXR2Q6PJQ5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
FOXR2Q6PJQ5 AC116050.2-201ENST00000612102 1779 ntBASIC22.63■■□□□ 1.21
FOXR2Q6PJQ5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
FOXR2Q6PJQ5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXR2Q6PJQ5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
FOXR2Q6PJQ5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
FOXR2Q6PJQ5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.63■■□□□ 1.21
FOXR2Q6PJQ5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.63■■□□□ 1.21
FOXR2Q6PJQ5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.63■■□□□ 1.21
FOXR2Q6PJQ5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms