Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 AC009102.2-201ENST00000606772 1639 ntBASIC17.99■□□□□ 0.47
C11orf88Q6PI97 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.99■□□□□ 0.47
C11orf88Q6PI97 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.98■□□□□ 0.47
C11orf88Q6PI97 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C11orf88Q6PI97 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
C11orf88Q6PI97 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C11orf88Q6PI97 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.98■□□□□ 0.47
C11orf88Q6PI97 AC241377.3-202ENST00000626088 1088 ntBASIC17.98■□□□□ 0.47
C11orf88Q6PI97 AC241585.3-202ENST00000628937 1088 ntBASIC17.98■□□□□ 0.47
C11orf88Q6PI97 AC245100.8-202ENST00000629247 1058 ntBASIC17.98■□□□□ 0.47
C11orf88Q6PI97 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C11orf88Q6PI97 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
C11orf88Q6PI97 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
C11orf88Q6PI97 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C11orf88Q6PI97 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
C11orf88Q6PI97 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 SUDS3P1-201ENST00000505831 966 ntBASIC17.97■□□□□ 0.47
C11orf88Q6PI97 AC024257.2-201ENST00000549699 147 ntBASIC17.97■□□□□ 0.47
C11orf88Q6PI97 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 CA15P2-201ENST00000611168 834 ntBASIC17.97■□□□□ 0.47
C11orf88Q6PI97 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
C11orf88Q6PI97 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
C11orf88Q6PI97 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
C11orf88Q6PI97 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
C11orf88Q6PI97 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 BCL2-203ENST00000589955 5011 ntBASIC17.94■□□□□ 0.46
C11orf88Q6PI97 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 C17orf82-201ENST00000623772 1530 ntBASIC17.94■□□□□ 0.46
C11orf88Q6PI97 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
C11orf88Q6PI97 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms