Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AC010525.1-201ENST00000585559 441 ntBASIC18.97■□□□□ 0.63
ZNF544Q6NX49 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.97■□□□□ 0.63
ZNF544Q6NX49 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.97■□□□□ 0.63
ZNF544Q6NX49 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.97■□□□□ 0.63
ZNF544Q6NX49 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF544Q6NX49 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF544Q6NX49 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
ZNF544Q6NX49 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.97■□□□□ 0.63
ZNF544Q6NX49 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF544Q6NX49 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF544Q6NX49 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ZNF544Q6NX49 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 AC087623.3-201ENST00000607047 1098 ntBASIC18.96■□□□□ 0.63
ZNF544Q6NX49 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 AL354811.1-201ENST00000610286 706 ntBASIC18.96■□□□□ 0.63
ZNF544Q6NX49 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.96■□□□□ 0.63
ZNF544Q6NX49 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 YBX1P1-201ENST00000445822 960 ntBASIC18.95■□□□□ 0.62
ZNF544Q6NX49 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 AL020996.1-203ENST00000536896 2307 ntBASIC18.95■□□□□ 0.62
ZNF544Q6NX49 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.95■□□□□ 0.62
ZNF544Q6NX49 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 AC079089.2-201ENST00000531211 1277 ntBASIC18.94■□□□□ 0.62
ZNF544Q6NX49 AC068587.7-201ENST00000641602 218 ntBASIC18.94■□□□□ 0.62
ZNF544Q6NX49 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 LINC01006-201ENST00000333319 2292 ntBASIC18.94■□□□□ 0.62
ZNF544Q6NX49 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ZNF544Q6NX49 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 AC027612.3-201ENST00000413684 1047 ntBASIC18.93■□□□□ 0.62
ZNF544Q6NX49 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 AC012414.1-201ENST00000556676 535 ntBASIC18.93■□□□□ 0.62
ZNF544Q6NX49 AC092666.2-201ENST00000613287 246 ntBASIC18.93■□□□□ 0.62
ZNF544Q6NX49 AC087239.1-201ENST00000622671 572 ntBASIC18.93■□□□□ 0.62
ZNF544Q6NX49 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF544Q6NX49 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF544Q6NX49 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF544Q6NX49 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms