Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 AC006128.1-201ENST00000624704 1661 ntBASIC16.43■□□□□ 0.22
FAM78BQ5VT40 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
FAM78BQ5VT40 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 AC010141.3-201ENST00000456659 717 ntBASIC16.42■□□□□ 0.22
FAM78BQ5VT40 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.42■□□□□ 0.22
FAM78BQ5VT40 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 AP005212.1-201ENST00000581547 1997 ntBASIC16.41■□□□□ 0.22
FAM78BQ5VT40 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 AC006455.2-201ENST00000429931 906 ntBASIC16.41■□□□□ 0.22
FAM78BQ5VT40 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 AC073314.1-201ENST00000568729 2216 ntBASIC16.41■□□□□ 0.22
FAM78BQ5VT40 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM78BQ5VT40 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.4■□□□□ 0.22
FAM78BQ5VT40 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 PCDHAC2-203ENST00000615316 3011 ntBASIC16.4■□□□□ 0.22
FAM78BQ5VT40 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FAM78BQ5VT40 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.39■□□□□ 0.22
FAM78BQ5VT40 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 AP004607.7-201ENST00000527152 1677 ntBASIC16.39■□□□□ 0.21
FAM78BQ5VT40 AFG3L1P-217ENST00000557444 2447 ntBASIC16.39■□□□□ 0.21
FAM78BQ5VT40 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
FAM78BQ5VT40 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
FAM78BQ5VT40 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FAM78BQ5VT40 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
FAM78BQ5VT40 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms