Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 AL023875.1-201ENST00000640777 796 ntBASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 AC097493.4-201ENST00000641197 219 ntBASIC14.13□□□□□ -0.15
VPS13DQ5THJ4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 AC233702.5-201ENST00000584107 538 ntBASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 RPS2P55-201ENST00000397318 883 ntBASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 AC107956.1-201ENST00000494359 873 ntBASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VPS13DQ5THJ4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 POM121L13P-201ENST00000422362 380 ntBASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 FAM197Y4-202ENST00000622692 608 ntBASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 AC092053.2-201ENST00000640557 1818 ntBASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13DQ5THJ4 C11orf96-202ENST00000528572 1834 ntBASIC14.1□□□□□ -0.15
VPS13DQ5THJ4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VPS13DQ5THJ4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13DQ5THJ4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS13DQ5THJ4 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VPS13DQ5THJ4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13DQ5THJ4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VPS13DQ5THJ4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13DQ5THJ4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms