Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.66■■□□□ 1.06
ATP13A4Q4VNC1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 SLC7A5P2-201ENST00000553010 536 ntBASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP13A4Q4VNC1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP13A4Q4VNC1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP13A4Q4VNC1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP13A4Q4VNC1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP13A4Q4VNC1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP13A4Q4VNC1 KRT18P14-201ENST00000534205 1250 ntBASIC21.64■■□□□ 1.05
ATP13A4Q4VNC1 AC008175.2-201ENST00000612840 297 ntBASIC21.64■■□□□ 1.05
ATP13A4Q4VNC1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP13A4Q4VNC1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP13A4Q4VNC1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP13A4Q4VNC1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP13A4Q4VNC1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP13A4Q4VNC1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
ATP13A4Q4VNC1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 AC073314.1-201ENST00000568729 2216 ntBASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 POU5F1P4-201ENST00000413175 1085 ntBASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 KRT18P61-201ENST00000585825 1298 ntBASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 AC004854.2-201ENST00000608450 1441 ntBASIC21.63■■□□□ 1.05
ATP13A4Q4VNC1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 AC010141.2-201ENST00000452426 721 ntBASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 RARRES2P11-201ENST00000635158 484 ntBASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.62■■□□□ 1.05
ATP13A4Q4VNC1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.61■■□□□ 1.05
ATP13A4Q4VNC1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms