Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM60Q495X7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.99■■□□□ 1.27
TRIM60Q495X7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
TRIM60Q495X7 TSPY15P-201ENST00000457163 923 ntBASIC22.99■■□□□ 1.27
TRIM60Q495X7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM60Q495X7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
TRIM60Q495X7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
TRIM60Q495X7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM60Q495X7 AL049637.2-201ENST00000641778 930 ntBASIC22.99■■□□□ 1.27
TRIM60Q495X7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM60Q495X7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.99■■□□□ 1.27
TRIM60Q495X7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM60Q495X7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM60Q495X7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.99■■□□□ 1.27
TRIM60Q495X7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM60Q495X7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TRIM60Q495X7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM60Q495X7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
TRIM60Q495X7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM60Q495X7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM60Q495X7 AC087499.1-201ENST00000418141 1075 ntBASIC22.98■■□□□ 1.27
TRIM60Q495X7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.98■■□□□ 1.27
TRIM60Q495X7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.98■■□□□ 1.27
TRIM60Q495X7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
TRIM60Q495X7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
TRIM60Q495X7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM60Q495X7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM60Q495X7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
TRIM60Q495X7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRIM60Q495X7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC22.98■■□□□ 1.27
TRIM60Q495X7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM60Q495X7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.97■■□□□ 1.27
TRIM60Q495X7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
TRIM60Q495X7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM60Q495X7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
TRIM60Q495X7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
TRIM60Q495X7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TRIM60Q495X7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.97■■□□□ 1.27
TRIM60Q495X7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.97■■□□□ 1.27
TRIM60Q495X7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM60Q495X7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.96■■□□□ 1.27
TRIM60Q495X7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM60Q495X7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM60Q495X7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM60Q495X7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM60Q495X7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM60Q495X7 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.96■■□□□ 1.27
TRIM60Q495X7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIM60Q495X7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.96■■□□□ 1.27
TRIM60Q495X7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.96■■□□□ 1.27
TRIM60Q495X7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.96■■□□□ 1.27
TRIM60Q495X7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
TRIM60Q495X7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.96■■□□□ 1.27
TRIM60Q495X7 MTDHP1-201ENST00000605323 784 ntBASIC22.96■■□□□ 1.27
TRIM60Q495X7 AC124016.1-201ENST00000609552 612 ntBASIC22.96■■□□□ 1.27
TRIM60Q495X7 AL023875.1-201ENST00000640777 796 ntBASIC22.96■■□□□ 1.27
TRIM60Q495X7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM60Q495X7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM60Q495X7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM60Q495X7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TRIM60Q495X7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
TRIM60Q495X7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM60Q495X7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM60Q495X7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM60Q495X7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM60Q495X7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.26
TRIM60Q495X7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
TRIM60Q495X7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TRIM60Q495X7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.95■■□□□ 1.26
TRIM60Q495X7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.95■■□□□ 1.26
TRIM60Q495X7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.95■■□□□ 1.26
TRIM60Q495X7 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.95■■□□□ 1.26
TRIM60Q495X7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.95■■□□□ 1.26
TRIM60Q495X7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.95■■□□□ 1.26
TRIM60Q495X7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM60Q495X7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM60Q495X7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM60Q495X7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM60Q495X7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM60Q495X7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM60Q495X7 CYP21A1P-202ENST00000354927 1481 ntBASIC22.94■■□□□ 1.26
TRIM60Q495X7 RCN1P1-201ENST00000400413 996 ntBASIC22.94■■□□□ 1.26
TRIM60Q495X7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM60Q495X7 AC007322.3-201ENST00000426526 701 ntBASIC22.94■■□□□ 1.26
TRIM60Q495X7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM60Q495X7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.94■■□□□ 1.26
TRIM60Q495X7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.94■■□□□ 1.26
TRIM60Q495X7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TRIM60Q495X7 MIR4785-201ENST00000585005 73 ntBASIC22.94■■□□□ 1.26
TRIM60Q495X7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.93■■□□□ 1.26
TRIM60Q495X7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM60Q495X7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TRIM60Q495X7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22.93■■□□□ 1.26
TRIM60Q495X7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.93■■□□□ 1.26
TRIM60Q495X7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.93■■□□□ 1.26
TRIM60Q495X7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
TRIM60Q495X7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TRIM60Q495X7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TRIM60Q495X7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.93■■□□□ 1.26
TRIM60Q495X7 AC105020.6-201ENST00000621523 1217 ntBASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms