Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RASGEF1BQ0VAM2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.84■□□□□ 0.61
RASGEF1BQ0VAM2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RASGEF1BQ0VAM2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RASGEF1BQ0VAM2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RASGEF1BQ0VAM2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RASGEF1BQ0VAM2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RASGEF1BQ0VAM2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RASGEF1BQ0VAM2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RASGEF1BQ0VAM2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RASGEF1BQ0VAM2 FEM1AP4-201ENST00000443167 1987 ntBASIC18.83■□□□□ 0.61
RASGEF1BQ0VAM2 AC016769.1-201ENST00000409132 1010 ntBASIC18.83■□□□□ 0.6
RASGEF1BQ0VAM2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.83■□□□□ 0.6
RASGEF1BQ0VAM2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.83■□□□□ 0.6
RASGEF1BQ0VAM2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.83■□□□□ 0.6
RASGEF1BQ0VAM2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RASGEF1BQ0VAM2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
RASGEF1BQ0VAM2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RASGEF1BQ0VAM2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 AC010141.2-201ENST00000452426 721 ntBASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 AC008175.2-201ENST00000612840 297 ntBASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RASGEF1BQ0VAM2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RASGEF1BQ0VAM2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RASGEF1BQ0VAM2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 IKBKGP1-201ENST00000612193 1073 ntBASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RASGEF1BQ0VAM2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RASGEF1BQ0VAM2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms