Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 VEL1YGL258W 621 nt1.22□□□□□ -2.21
LSM6Q06406 ACB1YGR037C 264 nt1.22□□□□□ -2.21
LSM6Q06406 YGR064WYGR064W 369 nt1.22□□□□□ -2.21
LSM6Q06406 YGR114CYGR114C 390 nt1.22□□□□□ -2.21
LSM6Q06406 AIM18YHR198C 966 nt1.22□□□□□ -2.21
LSM6Q06406 TPK3YKL166C 1197 nt1.22□□□□□ -2.21
LSM6Q06406 YOR392WYOR392W 444 nt1.22□□□□□ -2.21
LSM6Q06406 RTT101YJL047C 2529 nt1.22□□□□□ -2.21
LSM6Q06406 CFT2YLR115W 2580 nt1.21□□□□□ -2.22
LSM6Q06406 CLB5YPR120C 1308 nt1.21□□□□□ -2.22
LSM6Q06406 KAR5YMR065W 1515 nt1.21□□□□□ -2.22
LSM6Q06406 URK1YNR012W 1506 nt1.21□□□□□ -2.22
LSM6Q06406 RUD3YOR216C 1455 nt1.21□□□□□ -2.22
LSM6Q06406 YCR099CYCR099C 468 nt1.21□□□□□ -2.22
LSM6Q06406 YDR090CYDR090C 933 nt1.21□□□□□ -2.22
LSM6Q06406 NCB2YDR397C 441 nt1.21□□□□□ -2.22
LSM6Q06406 EMI1YDR512C 564 nt1.21□□□□□ -2.22
LSM6Q06406 VTC1YER072W 390 nt1.21□□□□□ -2.22
LSM6Q06406 SUP56tL(CAA)A 82 nt1.21□□□□□ -2.22
LSM6Q06406 SUP53tL(CAA)C 82 nt1.21□□□□□ -2.22
LSM6Q06406 tL(CAA)DtL(CAA)D 82 nt1.21□□□□□ -2.22
LSM6Q06406 tL(CAA)G1tL(CAA)G1 82 nt1.21□□□□□ -2.22
LSM6Q06406 SUP54tL(CAA)G2 82 nt1.21□□□□□ -2.22
LSM6Q06406 tL(CAA)G3tL(CAA)G3 82 nt1.21□□□□□ -2.22
LSM6Q06406 tL(CAA)KtL(CAA)K 82 nt1.21□□□□□ -2.22
LSM6Q06406 tL(CAA)LtL(CAA)L 82 nt1.21□□□□□ -2.22
LSM6Q06406 tL(CAA)MtL(CAA)M 82 nt1.21□□□□□ -2.22
LSM6Q06406 tL(CAA)NtL(CAA)N 82 nt1.21□□□□□ -2.22
LSM6Q06406 PEX21YGR239C 867 nt1.21□□□□□ -2.22
LSM6Q06406 CSM2YIL132C 642 nt1.21□□□□□ -2.22
LSM6Q06406 GTT1YIR038C 705 nt1.21□□□□□ -2.22
LSM6Q06406 PRE8YML092C 753 nt1.21□□□□□ -2.22
LSM6Q06406 YBL077WYBL077W 432 nt1.21□□□□□ -2.22
LSM6Q06406 LTO1YNL260C 597 nt1.21□□□□□ -2.22
LSM6Q06406 RPC40YPR110C 1008 nt1.21□□□□□ -2.22
LSM6Q06406 MED8YBR193C 672 nt1.21□□□□□ -2.22
LSM6Q06406 APA1YCL050C 966 nt1.21□□□□□ -2.22
LSM6Q06406 MAL33YBR297W 1407 nt1.21□□□□□ -2.22
LSM6Q06406 URB2YJR041C 3525 nt1.2□□□□□ -2.22
LSM6Q06406 SLF1YDR515W 1344 nt1.2□□□□□ -2.22
LSM6Q06406 YNR066CYNR066C 1311 nt1.2□□□□□ -2.22
LSM6Q06406 MDM10YAL010C 1482 nt1.2□□□□□ -2.22
LSM6Q06406 FAB1YFR019W 6837 nt1.2□□□□□ -2.22
LSM6Q06406 snR76snR76 109 nt1.2□□□□□ -2.22
LSM6Q06406 HLR1YDR528W 1272 nt1.2□□□□□ -2.22
LSM6Q06406 RPL11BYGR085C 525 nt1.2□□□□□ -2.22
LSM6Q06406 PAU14YIL176C 363 nt1.2□□□□□ -2.22
LSM6Q06406 YIR036W-AYIR036W-A 402 nt1.2□□□□□ -2.22
LSM6Q06406 PAU1YJL223C 363 nt1.2□□□□□ -2.22
LSM6Q06406 VTI1YMR197C 654 nt1.2□□□□□ -2.22
LSM6Q06406 YBR013CYBR013C 390 nt1.2□□□□□ -2.22
LSM6Q06406 YRO2YBR054W 1035 nt1.2□□□□□ -2.22
LSM6Q06406 RPL11AYPR102C 525 nt1.2□□□□□ -2.22
LSM6Q06406 YSA1YBR111C 696 nt1.2□□□□□ -2.22
LSM6Q06406 VTC3YPL019C 2508 nt1.2□□□□□ -2.22
LSM6Q06406 DNF3YMR162C 4971 nt1.19□□□□□ -2.22
LSM6Q06406 YEL043WYEL043W 2871 nt1.19□□□□□ -2.22
LSM6Q06406 GYP5YPL249C 2685 nt1.19□□□□□ -2.22
LSM6Q06406 VPS35YJL154C 2835 nt1.19□□□□□ -2.22
LSM6Q06406 ATP17YDR377W 306 nt1.19□□□□□ -2.22
LSM6Q06406 SDC1YDR469W 528 nt1.19□□□□□ -2.22
LSM6Q06406 YGL101WYGL101W 648 nt1.19□□□□□ -2.22
LSM6Q06406 RPA34YJL148W 702 nt1.19□□□□□ -2.22
LSM6Q06406 YKL070WYKL070W 510 nt1.19□□□□□ -2.22
LSM6Q06406 RNP1YLL046C 750 nt1.19□□□□□ -2.22
LSM6Q06406 COA4YLR218C 453 nt1.19□□□□□ -2.22
LSM6Q06406 PRM6YML047C 1059 nt1.19□□□□□ -2.22
LSM6Q06406 YML084WYML084W 309 nt1.19□□□□□ -2.22
LSM6Q06406 SRT1YMR101C 1032 nt1.19□□□□□ -2.22
LSM6Q06406 YMR272W-BYMR272W-B 108 nt1.19□□□□□ -2.22
LSM6Q06406 PDR17YNL264C 1053 nt1.19□□□□□ -2.22
LSM6Q06406 VPH1YOR270C 2523 nt1.19□□□□□ -2.22
LSM6Q06406 RTT107YHR154W 3213 nt1.19□□□□□ -2.22
LSM6Q06406 BUD2YKL092C 3315 nt1.18□□□□□ -2.22
LSM6Q06406 MEC1YBR136W 7107 nt1.18□□□□□ -2.22
LSM6Q06406 HER1YOR227W 3741 nt1.18□□□□□ -2.22
LSM6Q06406 PET127YOR017W 2403 nt1.18□□□□□ -2.22
LSM6Q06406 SIR4YDR227W 4077 nt1.18□□□□□ -2.22
LSM6Q06406 PUF4YGL014W 2667 nt1.18□□□□□ -2.22
LSM6Q06406 snR70snR70 164 nt1.18□□□□□ -2.22
LSM6Q06406 PGD1YGL025C 1194 nt1.18□□□□□ -2.22
LSM6Q06406 MRPS17YMR188C 714 nt1.18□□□□□ -2.22
LSM6Q06406 BPH1YCR032W 6504 nt1.18□□□□□ -2.22
LSM6Q06406 INP53YOR109W 3324 nt1.18□□□□□ -2.22
LSM6Q06406 TDA9YML081W 3756 nt1.18□□□□□ -2.22
LSM6Q06406 APC5YOR249C 2058 nt1.17□□□□□ -2.22
LSM6Q06406 UBP16YPL072W 1500 nt1.17□□□□□ -2.22
LSM6Q06406 BRP1YGL007W 378 nt1.17□□□□□ -2.22
LSM6Q06406 USB1YLR132C 873 nt1.17□□□□□ -2.22
LSM6Q06406 YLR379WYLR379W 375 nt1.17□□□□□ -2.22
LSM6Q06406 RGM1YMR182C 636 nt1.17□□□□□ -2.22
LSM6Q06406 snR43snR43 209 nt1.17□□□□□ -2.22
LSM6Q06406 FYV8YGR196C 2454 nt1.16□□□□□ -2.22
LSM6Q06406 STI1YOR027W 1770 nt1.16□□□□□ -2.22
LSM6Q06406 MUM3YOR298W 1440 nt1.16□□□□□ -2.22
LSM6Q06406 RIT1YMR283C 1542 nt1.16□□□□□ -2.22
LSM6Q06406 YEL1YBL060W 2064 nt1.16□□□□□ -2.22
LSM6Q06406 POL4YCR014C 1749 nt1.16□□□□□ -2.22
LSM6Q06406 SAE2YGL175C 1038 nt1.16□□□□□ -2.22
LSM6Q06406 ADH4YGL256W 1149 nt1.16□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 19.6 ms