Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCL20P78556 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.38■□□□□ 0.21
CCL20P78556 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CCL20P78556 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL20P78556 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CCL20P78556 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL20P78556 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL20P78556 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.38■□□□□ 0.21
CCL20P78556 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.38■□□□□ 0.21
CCL20P78556 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL20P78556 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.38■□□□□ 0.21
CCL20P78556 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.38■□□□□ 0.21
CCL20P78556 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CCL20P78556 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CCL20P78556 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CCL20P78556 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL20P78556 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL20P78556 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CCL20P78556 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL20P78556 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL20P78556 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL20P78556 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL20P78556 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL20P78556 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL20P78556 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL20P78556 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CCL20P78556 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CCL20P78556 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL20P78556 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CCL20P78556 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL20P78556 NEFHP1-201ENST00000412845 2629 ntBASIC16.37■□□□□ 0.21
CCL20P78556 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CCL20P78556 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CCL20P78556 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CCL20P78556 AC125437.2-201ENST00000625180 2167 ntBASIC16.37■□□□□ 0.21
CCL20P78556 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL20P78556 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL20P78556 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL20P78556 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.37■□□□□ 0.21
CCL20P78556 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL20P78556 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL20P78556 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL20P78556 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
CCL20P78556 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL20P78556 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL20P78556 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL20P78556 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL20P78556 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL20P78556 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL20P78556 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.36■□□□□ 0.21
CCL20P78556 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCL20P78556 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.36■□□□□ 0.21
CCL20P78556 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCL20P78556 AC129492.7-201ENST00000622992 756 ntBASIC16.36■□□□□ 0.21
CCL20P78556 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL20P78556 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL20P78556 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.36■□□□□ 0.21
CCL20P78556 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.36■□□□□ 0.21
CCL20P78556 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.36■□□□□ 0.21
CCL20P78556 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CCL20P78556 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL20P78556 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL20P78556 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCL20P78556 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCL20P78556 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCL20P78556 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL20P78556 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL20P78556 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCL20P78556 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL20P78556 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL20P78556 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL20P78556 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 TCF3P1-201ENST00000423021 1937 ntBASIC16.35■□□□□ 0.21
CCL20P78556 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.35■□□□□ 0.21
CCL20P78556 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL20P78556 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL20P78556 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.35■□□□□ 0.21
CCL20P78556 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCL20P78556 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL20P78556 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL20P78556 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.35■□□□□ 0.21
CCL20P78556 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.34■□□□□ 0.21
CCL20P78556 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms