Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SNRPFP62306 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC22.65■■□□□ 1.22
SNRPFP62306 MFSD11-216ENST00000590393 1141 ntBASIC22.65■■□□□ 1.22
SNRPFP62306 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
SNRPFP62306 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.65■■□□□ 1.22
SNRPFP62306 AC116050.2-201ENST00000612102 1779 ntBASIC22.65■■□□□ 1.22
SNRPFP62306 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SNRPFP62306 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.65■■□□□ 1.22
SNRPFP62306 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SNRPFP62306 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.65■■□□□ 1.22
SNRPFP62306 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SNRPFP62306 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
SNRPFP62306 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SNRPFP62306 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SNRPFP62306 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
SNRPFP62306 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SNRPFP62306 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.22
SNRPFP62306 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.64■■□□□ 1.22
SNRPFP62306 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SNRPFP62306 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
SNRPFP62306 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.64■■□□□ 1.21
SNRPFP62306 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.64■■□□□ 1.21
SNRPFP62306 AL162412.1-201ENST00000567129 965 ntBASIC22.64■■□□□ 1.21
SNRPFP62306 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.21
SNRPFP62306 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SNRPFP62306 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
SNRPFP62306 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.64■■□□□ 1.21
SNRPFP62306 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
SNRPFP62306 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SNRPFP62306 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SNRPFP62306 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.63■■□□□ 1.21
SNRPFP62306 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNRPFP62306 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNRPFP62306 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.63■■□□□ 1.21
SNRPFP62306 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNRPFP62306 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.63■■□□□ 1.21
SNRPFP62306 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNRPFP62306 AC013268.1-206ENST00000638368 961 ntBASIC22.63■■□□□ 1.21
SNRPFP62306 AC112229.1-201ENST00000639295 961 ntBASIC22.63■■□□□ 1.21
SNRPFP62306 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SNRPFP62306 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNRPFP62306 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.63■■□□□ 1.21
SNRPFP62306 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNRPFP62306 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
SNRPFP62306 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNRPFP62306 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.62■■□□□ 1.21
SNRPFP62306 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.62■■□□□ 1.21
SNRPFP62306 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SNRPFP62306 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
SNRPFP62306 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNRPFP62306 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SNRPFP62306 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNRPFP62306 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SNRPFP62306 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.62■■□□□ 1.21
SNRPFP62306 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
SNRPFP62306 BID-214ENST00000617586 542 ntTSL 5 BASIC22.62■■□□□ 1.21
SNRPFP62306 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNRPFP62306 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNRPFP62306 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNRPFP62306 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
SNRPFP62306 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNRPFP62306 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.61■■□□□ 1.21
SNRPFP62306 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNRPFP62306 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.61■■□□□ 1.21
SNRPFP62306 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.61■■□□□ 1.21
SNRPFP62306 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.61■■□□□ 1.21
SNRPFP62306 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNRPFP62306 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNRPFP62306 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.61■■□□□ 1.21
SNRPFP62306 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.61■■□□□ 1.21
SNRPFP62306 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SNRPFP62306 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.61■■□□□ 1.21
SNRPFP62306 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SNRPFP62306 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
SNRPFP62306 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.61■■□□□ 1.21
SNRPFP62306 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.61■■□□□ 1.21
SNRPFP62306 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.61■■□□□ 1.21
SNRPFP62306 AC011767.1-201ENST00000617410 1153 ntBASIC22.61■■□□□ 1.21
SNRPFP62306 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.61■■□□□ 1.21
SNRPFP62306 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SNRPFP62306 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SNRPFP62306 AC006128.1-201ENST00000624704 1661 ntBASIC22.61■■□□□ 1.21
SNRPFP62306 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNRPFP62306 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNRPFP62306 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SNRPFP62306 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.6■■□□□ 1.21
SNRPFP62306 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNRPFP62306 PLK5-205ENST00000642079 1969 ntBASIC22.6■■□□□ 1.21
SNRPFP62306 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.6■■□□□ 1.21
SNRPFP62306 CDV3P1-201ENST00000471403 739 ntBASIC22.6■■□□□ 1.21
SNRPFP62306 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SNRPFP62306 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SNRPFP62306 DUX4L16-201ENST00000555130 1264 ntBASIC22.6■■□□□ 1.21
SNRPFP62306 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.6■■□□□ 1.21
SNRPFP62306 AL591742.1-201ENST00000604433 565 ntBASIC22.6■■□□□ 1.21
SNRPFP62306 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNRPFP62306 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SNRPFP62306 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNRPFP62306 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNRPFP62306 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms