Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC133552.2-202ENST00000575694 574 ntBASIC21.32■■□□□ 1
CDH4P55283 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CDH4P55283 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.32■■□□□ 1
CDH4P55283 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.32■■□□□ 1
CDH4P55283 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDH4P55283 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CDH4P55283 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.32■■□□□ 1
CDH4P55283 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH4P55283 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDH4P55283 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDH4P55283 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDH4P55283 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH4P55283 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH4P55283 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH4P55283 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.31■■□□□ 1
CDH4P55283 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
CDH4P55283 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.31■■□□□ 1
CDH4P55283 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.31■■□□□ 1
CDH4P55283 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.31■■□□□ 1
CDH4P55283 CDV3P1-201ENST00000471403 739 ntBASIC21.31■■□□□ 1
CDH4P55283 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.31■■□□□ 1
CDH4P55283 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDH4P55283 AC069236.1-201ENST00000604339 616 ntBASIC21.31■■□□□ 1
CDH4P55283 AL121832.2-201ENST00000610979 668 ntBASIC21.31■■□□□ 1
CDH4P55283 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDH4P55283 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.31■■□□□ 1
CDH4P55283 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH4P55283 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH4P55283 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH4P55283 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH4P55283 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.31■■□□□ 1
CDH4P55283 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.3■■□□□ 1
CDH4P55283 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDH4P55283 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH4P55283 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH4P55283 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.3■■□□□ 1
CDH4P55283 AC008694.1-202ENST00000636953 945 ntBASIC21.3■■□□□ 1
CDH4P55283 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH4P55283 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH4P55283 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDH4P55283 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.29■■□□□ 1
CDH4P55283 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CDH4P55283 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.29■■□□□ 1
CDH4P55283 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH4P55283 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDH4P55283 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.29■■□□□ 1
CDH4P55283 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDH4P55283 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CDH4P55283 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH4P55283 ID1-201ENST00000376105 1233 ntBASIC21.29■■□□□ 1
CDH4P55283 GPX1P1-201ENST00000388829 606 ntBASIC21.29■■□□□ 1
CDH4P55283 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDH4P55283 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDH4P55283 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.29■■□□□ 1
CDH4P55283 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.29■■□□□ 1
CDH4P55283 OR10C1-204ENST00000622521 1039 ntBASIC21.29■■□□□ 1
CDH4P55283 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.29■■□□□ 1
CDH4P55283 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDH4P55283 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
CDH4P55283 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.29■■□□□ 1
CDH4P55283 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDH4P55283 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH4P55283 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CDH4P55283 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CDH4P55283 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CDH4P55283 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDH4P55283 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDH4P55283 AC083906.2-201ENST00000511578 360 ntBASIC21.28■■□□□ 1
CDH4P55283 AF201337.1-201ENST00000520239 748 ntBASIC21.28■■□□□ 1
CDH4P55283 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDH4P55283 AC016405.3-201ENST00000607710 860 ntBASIC21.28■■□□□ 1
CDH4P55283 FAM21FP-204ENST00000608637 956 ntBASIC21.28■■□□□ 1
CDH4P55283 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.28■■□□□ 1
CDH4P55283 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.28■■□□□ 1
CDH4P55283 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.28■■□□□ 1
CDH4P55283 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDH4P55283 AL024507.2-201ENST00000606070 2574 ntBASIC21.28■■□□□ 1
CDH4P55283 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDH4P55283 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH4P55283 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.27■■□□□ 1
CDH4P55283 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH4P55283 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CDH4P55283 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDH4P55283 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH4P55283 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.27■■□□□ 1
CDH4P55283 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH4P55283 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.27■■□□□ 1
CDH4P55283 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.27■■□□□ 1
CDH4P55283 AC007322.3-201ENST00000426526 701 ntBASIC21.27■■□□□ 1
CDH4P55283 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.27■■□□□ 1
CDH4P55283 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.27■■□□□ 1
CDH4P55283 RARRES2P4-201ENST00000514074 484 ntBASIC21.27■■□□□ 1
CDH4P55283 AC116050.2-201ENST00000612102 1779 ntBASIC21.27■■□□□ 1
CDH4P55283 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH4P55283 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.27■■□□□ 1
CDH4P55283 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH4P55283 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
CDH4P55283 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CDH4P55283 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDH4P55283 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms