Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 YLR458WYLR458W 381 nt5.1□□□□□ -1.59
NUP42P49686 snR49snR49 165 nt5.1□□□□□ -1.59
NUP42P49686 DPB11YJL090C 2295 nt5.09□□□□□ -1.59
NUP42P49686 GDE1YPL110C 3672 nt5.09□□□□□ -1.59
NUP42P49686 RKM1YPL208W 1752 nt5.09□□□□□ -1.59
NUP42P49686 YDR134CYDR134C 411 nt5.09□□□□□ -1.59
NUP42P49686 ADK1YDR226W 669 nt5.09□□□□□ -1.59
NUP42P49686 IRC4YDR540C 540 nt5.09□□□□□ -1.59
NUP42P49686 PIL1YGR086C 1020 nt5.09□□□□□ -1.59
NUP42P49686 PAU14YIL176C 363 nt5.09□□□□□ -1.59
NUP42P49686 PAU1YJL223C 363 nt5.09□□□□□ -1.59
NUP42P49686 RAD27YKL113C 1149 nt5.09□□□□□ -1.59
NUP42P49686 ABF2YMR072W 552 nt5.09□□□□□ -1.59
NUP42P49686 YBL044WYBL044W 369 nt5.09□□□□□ -1.59
NUP42P49686 DAD3YBR233W-A 285 nt5.09□□□□□ -1.59
NUP42P49686 YAP1YML007W 1953 nt5.09□□□□□ -1.6
NUP42P49686 ARP7YPR034W 1434 nt5.08□□□□□ -1.6
NUP42P49686 BUD5YCR038C 1929 nt5.08□□□□□ -1.6
NUP42P49686 YDR250CYDR250C 276 nt5.08□□□□□ -1.6
NUP42P49686 RPS18AYDR450W 441 nt5.08□□□□□ -1.6
NUP42P49686 AGX1YFL030W 1158 nt5.08□□□□□ -1.6
NUP42P49686 SDH2YLL041C 801 nt5.08□□□□□ -1.6
NUP42P49686 YLR358CYLR358C 564 nt5.08□□□□□ -1.6
NUP42P49686 YOR131CYOR131C 657 nt5.08□□□□□ -1.6
NUP42P49686 RPS28AYOR167C 204 nt5.08□□□□□ -1.6
NUP42P49686 PCF11YDR228C 1881 nt5.08□□□□□ -1.6
NUP42P49686 CBP2YHL038C 1893 nt5.08□□□□□ -1.6
NUP42P49686 GMC1YDR506C 1827 nt5.08□□□□□ -1.6
NUP42P49686 PSY1YKL076C 384 nt5.07□□□□□ -1.6
NUP42P49686 TAR1YLR154W-C 375 nt5.07□□□□□ -1.6
NUP42P49686 BYE1YKL005C 1785 nt5.06□□□□□ -1.6
NUP42P49686 YML082WYML082W 1950 nt5.06□□□□□ -1.6
NUP42P49686 YDL007C-AYDL007C-A 258 nt5.06□□□□□ -1.6
NUP42P49686 YPT1YFL038C 621 nt5.06□□□□□ -1.6
NUP42P49686 YHR218W-AYHR218W-A 318 nt5.06□□□□□ -1.6
NUP42P49686 PAM16YJL104W 450 nt5.06□□□□□ -1.6
NUP42P49686 TMA10YLR327C 261 nt5.06□□□□□ -1.6
NUP42P49686 TVP18YMR071C 504 nt5.06□□□□□ -1.6
NUP42P49686 COX5AYNL052W 462 nt5.06□□□□□ -1.6
NUP42P49686 YBL112CYBL112C 318 nt5.06□□□□□ -1.6
NUP42P49686 YPR123CYPR123C 435 nt5.06□□□□□ -1.6
NUP42P49686 JJJ2YJL162C 1752 nt5.06□□□□□ -1.6
NUP42P49686 ELM1YKL048C 1923 nt5.05□□□□□ -1.6
NUP42P49686 DOA1YKL213C 2148 nt5.05□□□□□ -1.6
NUP42P49686 SPI1YER150W 447 nt5.05□□□□□ -1.6
NUP42P49686 YGL081WYGL081W 963 nt5.05□□□□□ -1.6
NUP42P49686 DNM1YLL001W 2274 nt5.04□□□□□ -1.6
NUP42P49686 NUP116YMR047C 3342 nt5.04□□□□□ -1.6
NUP42P49686 COX9YDL067C 180 nt5.04□□□□□ -1.6
NUP42P49686 YHR214C-EYHR214C-E 300 nt5.04□□□□□ -1.6
NUP42P49686 RPA34YJL148W 702 nt5.04□□□□□ -1.6
NUP42P49686 YAR070CYAR070C 300 nt5.04□□□□□ -1.6
NUP42P49686 snR42snR42 351 nt5.04□□□□□ -1.6
NUP42P49686 MRC1YCL061C 3291 nt5.04□□□□□ -1.6
NUP42P49686 AIM21YIR003W 2040 nt5.04□□□□□ -1.6
NUP42P49686 FAA1YOR317W 2103 nt5.03□□□□□ -1.6
NUP42P49686 POL1YNL102W 4407 nt5.03□□□□□ -1.6
NUP42P49686 CCT7YJL111W 1653 nt5.03□□□□□ -1.6
NUP42P49686 RPE1YJL121C 717 nt5.03□□□□□ -1.6
NUP42P49686 MRP8YKL142W 660 nt5.03□□□□□ -1.6
NUP42P49686 ATG33YLR356W 594 nt5.03□□□□□ -1.6
NUP42P49686 YNL170WYNL170W 396 nt5.03□□□□□ -1.6
NUP42P49686 LDS2YOL047C 1071 nt5.03□□□□□ -1.6
NUP42P49686 YOL155W-AYOL155W-A 135 nt5.03□□□□□ -1.6
NUP42P49686 YHL017WYHL017W 1599 nt5.03□□□□□ -1.6
NUP42P49686 GPI10YGL142C 1851 nt5.03□□□□□ -1.6
NUP42P49686 LHP1YDL051W 828 nt5.02□□□□□ -1.61
NUP42P49686 RPS13YDR064W 456 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)BtG(GCC)B 71 nt5.02□□□□□ -1.61
NUP42P49686 SUF16tG(GCC)C 71 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)D1tG(GCC)D1 71 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)D2tG(GCC)D2 71 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)EtG(GCC)E 71 nt5.02□□□□□ -1.61
NUP42P49686 SUF20tG(GCC)F1 71 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)F2tG(GCC)F2 71 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)G1tG(GCC)G1 71 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)G2tG(GCC)G2 71 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)J1tG(GCC)J1 71 nt5.02□□□□□ -1.61
NUP42P49686 SUF23tG(GCC)J2 71 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)MtG(GCC)M 71 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)O1tG(GCC)O1 71 nt5.02□□□□□ -1.61
NUP42P49686 SUF17tG(GCC)O2 71 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)P1tG(GCC)P1 71 nt5.02□□□□□ -1.61
NUP42P49686 tG(GCC)P2tG(GCC)P2 71 nt5.02□□□□□ -1.61
NUP42P49686 YNL205CYNL205C 423 nt5.02□□□□□ -1.61
NUP42P49686 YOR011W-AYOR011W-A 207 nt5.02□□□□□ -1.61
NUP42P49686 CBC2YPL178W 627 nt5.02□□□□□ -1.61
NUP42P49686 GRC3YLL035W 1899 nt5.02□□□□□ -1.61
NUP42P49686 RED1YLR263W 2484 nt5.02□□□□□ -1.61
NUP42P49686 SPP382YLR424W 2127 nt5.02□□□□□ -1.61
NUP42P49686 SLP1YOR154W 1764 nt5.01□□□□□ -1.61
NUP42P49686 BIT2YBR270C 1638 nt5.01□□□□□ -1.61
NUP42P49686 ARO2YGL148W 1131 nt5.01□□□□□ -1.61
NUP42P49686 NSG1YHR133C 876 nt5.01□□□□□ -1.61
NUP42P49686 OM45YIL136W 1182 nt5.01□□□□□ -1.61
NUP42P49686 SWC7YLR385C 399 nt5.01□□□□□ -1.61
NUP42P49686 YNL338WYNL338W 159 nt5.01□□□□□ -1.61
NUP42P49686 CAF130YGR134W 3369 nt5.01□□□□□ -1.61
NUP42P49686 AIP1YMR092C 1848 nt5.01□□□□□ -1.61
NUP42P49686 VHR2YER064C 1518 nt5.01□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 45.2 ms