Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.57■■□□□ 1.04
MMP13P45452 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
MMP13P45452 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP13P45452 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
MMP13P45452 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
MMP13P45452 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
MMP13P45452 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.56■■□□□ 1.04
MMP13P45452 AC026271.2-201ENST00000428091 497 ntBASIC21.56■■□□□ 1.04
MMP13P45452 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.56■■□□□ 1.04
MMP13P45452 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.56■■□□□ 1.04
MMP13P45452 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MMP13P45452 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.55■■□□□ 1.04
MMP13P45452 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.55■■□□□ 1.04
MMP13P45452 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.55■■□□□ 1.04
MMP13P45452 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
MMP13P45452 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 DUX4L2-201ENST00000561772 1275 ntBASIC21.55■■□□□ 1.04
MMP13P45452 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.55■■□□□ 1.04
MMP13P45452 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
MMP13P45452 DUX4L6-201ENST00000626483 1275 ntBASIC21.55■■□□□ 1.04
MMP13P45452 DUX4L1-201ENST00000627662 1275 ntBASIC21.55■■□□□ 1.04
MMP13P45452 DUX4L8-201ENST00000629013 1275 ntBASIC21.55■■□□□ 1.04
MMP13P45452 DUX4L3-201ENST00000630187 1275 ntBASIC21.55■■□□□ 1.04
MMP13P45452 DUX4L7-201ENST00000630678 1275 ntBASIC21.55■■□□□ 1.04
MMP13P45452 DUX4L5-201ENST00000630834 1275 ntBASIC21.55■■□□□ 1.04
MMP13P45452 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
MMP13P45452 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MMP13P45452 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP13P45452 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP13P45452 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP13P45452 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP13P45452 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
MMP13P45452 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.54■■□□□ 1.04
MMP13P45452 AC034268.1-201ENST00000441047 882 ntBASIC21.54■■□□□ 1.04
MMP13P45452 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP13P45452 RNF165-205ENST00000588679 2904 ntBASIC21.54■■□□□ 1.04
MMP13P45452 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP13P45452 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP13P45452 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP13P45452 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
MMP13P45452 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP13P45452 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP13P45452 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.53■■□□□ 1.04
MMP13P45452 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
MMP13P45452 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.53■■□□□ 1.04
MMP13P45452 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.53■■□□□ 1.04
MMP13P45452 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP13P45452 EEF1DP3-203ENST00000566025 782 ntBASIC21.53■■□□□ 1.04
MMP13P45452 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP13P45452 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP13P45452 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP13P45452 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP13P45452 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP13P45452 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP13P45452 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP13P45452 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP13P45452 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MMP13P45452 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP13P45452 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MMP13P45452 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.52■■□□□ 1.04
MMP13P45452 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms