Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	GPI10	YGL142C	1851 nt		3.64	□□□□□ -1.83
CAF16	P43569	21S_rRNA	21S_rRNA	3296 nt		3.64	□□□□□ -1.83
CAF16	P43569	YCK2	YNL154C	1641 nt		3.64	□□□□□ -1.83
CAF16	P43569	YDL094C	YDL094C	510 nt		3.64	□□□□□ -1.83
CAF16	P43569	YER087C-A	YER087C-A	552 nt		3.64	□□□□□ -1.83
CAF16	P43569	YER135C	YER135C	393 nt		3.64	□□□□□ -1.83
CAF16	P43569	YGR017W	YGR017W	894 nt		3.64	□□□□□ -1.83
CAF16	P43569	tR(ACG)J	tR(ACG)J	73 nt		3.64	□□□□□ -1.83
CAF16	P43569	YHR138C	YHR138C	345 nt		3.64	□□□□□ -1.83
CAF16	P43569	LSM1	YJL124C	519 nt		3.64	□□□□□ -1.83
CAF16	P43569	SRL3	YKR091W	741 nt		3.64	□□□□□ -1.83
CAF16	P43569	PEX11	YOL147C	711 nt		3.64	□□□□□ -1.83
CAF16	P43569	RRD2	YPL152W	1077 nt		3.64	□□□□□ -1.83
CAF16	P43569	IOC2	YLR095C	2439 nt		3.64	□□□□□ -1.83
CAF16	P43569	VAC8	YEL013W	1737 nt		3.64	□□□□□ -1.83
CAF16	P43569	FOX2	YKR009C	2703 nt		3.64	□□□□□ -1.83
CAF16	P43569	GYL1	YMR192W	2163 nt		3.63	□□□□□ -1.83
CAF16	P43569	RPO21	YDL140C	5202 nt		3.63	□□□□□ -1.83
CAF16	P43569	YIL171W	YIL171W	330 nt		3.63	□□□□□ -1.83
CAF16	P43569	RPL14A	YKL006W	417 nt		3.63	□□□□□ -1.83
CAF16	P43569	YAL037W	YAL037W	804 nt		3.63	□□□□□ -1.83
CAF16	P43569	RAD33	YML011C	534 nt		3.63	□□□□□ -1.83
CAF16	P43569	OST6	YML019W	999 nt		3.63	□□□□□ -1.83
CAF16	P43569	CMC2	YBL059C-A	330 nt		3.63	□□□□□ -1.83
CAF16	P43569	YBR012C	YBR012C	420 nt		3.63	□□□□□ -1.83
CAF16	P43569	ALG14	YBR070C	714 nt		3.63	□□□□□ -1.83
CAF16	P43569	IRC16	YPR038W	360 nt		3.63	□□□□□ -1.83
CAF16	P43569	MSD1	YPL104W	1977 nt		3.62	□□□□□ -1.83
CAF16	P43569	GAD1	YMR250W	1758 nt		3.62	□□□□□ -1.83
CAF16	P43569	RPB9	YGL070C	369 nt		3.62	□□□□□ -1.83
CAF16	P43569	TPM2	YIL138C	486 nt		3.62	□□□□□ -1.83
CAF16	P43569	YAL056C-A	YAL056C-A	351 nt		3.62	□□□□□ -1.83
CAF16	P43569	MRPL39	YML009C	213 nt		3.62	□□□□□ -1.83
CAF16	P43569	PKR1	YMR123W	369 nt		3.62	□□□□□ -1.83
CAF16	P43569	RPL23A	YBL087C	414 nt		3.62	□□□□□ -1.83
CAF16	P43569	YCG1	YDR325W	3108 nt		3.62	□□□□□ -1.83
CAF16	P43569	KHA1	YJL094C	2622 nt		3.62	□□□□□ -1.83
CAF16	P43569	LCB4	YOR171C	1875 nt		3.62	□□□□□ -1.83
CAF16	P43569	STP2	YHR006W	1626 nt		3.62	□□□□□ -1.83
CAF16	P43569	ELM1	YKL048C	1923 nt		3.62	□□□□□ -1.83
CAF16	P43569	YMR018W	YMR018W	1545 nt		3.61	□□□□□ -1.83
CAF16	P43569	SWI3	YJL176C	2478 nt		3.61	□□□□□ -1.83
CAF16	P43569	CHD1	YER164W	4407 nt		3.61	□□□□□ -1.83
CAF16	P43569	RPS26B	YER131W	360 nt		3.61	□□□□□ -1.83
CAF16	P43569	tQ(UUG)C	tQ(UUG)C	72 nt		3.61	□□□□□ -1.83
CAF16	P43569	PET54	YGR222W	882 nt		3.61	□□□□□ -1.83
CAF16	P43569	tQ(UUG)D1	tQ(UUG)D1	72 nt		3.61	□□□□□ -1.83
CAF16	P43569	tQ(UUG)D2	tQ(UUG)D2	72 nt		3.61	□□□□□ -1.83
CAF16	P43569	tQ(UUG)D3	tQ(UUG)D3	72 nt		3.61	□□□□□ -1.83
CAF16	P43569	tQ(UUG)E1	tQ(UUG)E1	72 nt		3.61	□□□□□ -1.83
CAF16	P43569	tQ(UUG)H	tQ(UUG)H	72 nt		3.61	□□□□□ -1.83
CAF16	P43569	tQ(UUG)L	tQ(UUG)L	72 nt		3.61	□□□□□ -1.83
CAF16	P43569	tS(AGA)D3	tS(AGA)D3	83 nt		3.61	□□□□□ -1.83
CAF16	P43569	GEP4	YHR100C	558 nt		3.61	□□□□□ -1.83
CAF16	P43569	RPS4B	YHR203C	786 nt		3.61	□□□□□ -1.83
CAF16	P43569	YJR112W-A	YJR112W-A	330 nt		3.61	□□□□□ -1.83
CAF16	P43569	IRC19	YLL033W	693 nt		3.61	□□□□□ -1.83
CAF16	P43569	SUI1	YNL244C	327 nt		3.61	□□□□□ -1.83
CAF16	P43569	GDT1	YBR187W	843 nt		3.61	□□□□□ -1.83
CAF16	P43569	HFM1	YGL251C	3564 nt		3.61	□□□□□ -1.83
CAF16	P43569	ALY1	YKR021W	2748 nt		3.61	□□□□□ -1.83
CAF16	P43569	SLP1	YOR154W	1764 nt		3.61	□□□□□ -1.83
CAF16	P43569	SPE1	YKL184W	1401 nt		3.61	□□□□□ -1.83
CAF16	P43569	NUP159	YIL115C	4383 nt		3.6	□□□□□ -1.83
CAF16	P43569	BET3	YKR068C	582 nt		3.6	□□□□□ -1.83
CAF16	P43569	YNL058C	YNL058C	951 nt		3.6	□□□□□ -1.83
CAF16	P43569	YNL179C	YNL179C	438 nt		3.6	□□□□□ -1.83
CAF16	P43569	NCR1	YPL006W	3513 nt		3.6	□□□□□ -1.83
CAF16	P43569	MYO3	YKL129C	3819 nt		3.59	□□□□□ -1.83
CAF16	P43569	VBA4	YDR119W	2307 nt		3.59	□□□□□ -1.83
CAF16	P43569	ARF2	YDL137W	546 nt		3.59	□□□□□ -1.83
CAF16	P43569	MGT1	YDL200C	567 nt		3.59	□□□□□ -1.83
CAF16	P43569	RMP1	YLR145W	606 nt		3.59	□□□□□ -1.83
CAF16	P43569	YLR302C	YLR302C	363 nt		3.59	□□□□□ -1.83
CAF16	P43569	HHF2	YNL030W	312 nt		3.59	□□□□□ -1.83
CAF16	P43569	PFY1	YOR122C	381 nt		3.59	□□□□□ -1.83
CAF16	P43569	FEX1	YOR390W	1128 nt		3.59	□□□□□ -1.83
CAF16	P43569	FEX2	YPL279C	1128 nt		3.59	□□□□□ -1.83
CAF16	P43569	EMP70	YLR083C	2004 nt		3.59	□□□□□ -1.83
CAF16	P43569	SSL1	YLR005W	1386 nt		3.59	□□□□□ -1.83
CAF16	P43569	SRC1	YML034W	2505 nt		3.59	□□□□□ -1.84
CAF16	P43569	URB2	YJR041C	3525 nt		3.58	□□□□□ -1.84
CAF16	P43569	GLC7	YER133W	939 nt		3.58	□□□□□ -1.84
CAF16	P43569	PDX1	YGR193C	1233 nt		3.58	□□□□□ -1.84
CAF16	P43569	YLR269C	YLR269C	351 nt		3.58	□□□□□ -1.84
CAF16	P43569	JEN1	YKL217W	1851 nt		3.58	□□□□□ -1.84
CAF16	P43569	DAS1	YJL149W	1992 nt		3.58	□□□□□ -1.84
CAF16	P43569	MES1	YGR264C	2256 nt		3.58	□□□□□ -1.84
CAF16	P43569	DIT2	YDR402C	1470 nt		3.57	□□□□□ -1.84
CAF16	P43569	TCD1	YHR003C	1290 nt		3.57	□□□□□ -1.84
CAF16	P43569	MRPL38	YKL170W	417 nt		3.57	□□□□□ -1.84
CAF16	P43569	YAL068W-A	YAL068W-A	255 nt		3.57	□□□□□ -1.84
CAF16	P43569	YML084W	YML084W	309 nt		3.57	□□□□□ -1.84
CAF16	P43569	ARK1	YNL020C	1917 nt		3.57	□□□□□ -1.84
CAF16	P43569	NGL1	YOL042W	1092 nt		3.57	□□□□□ -1.84
CAF16	P43569	YOR053W	YOR053W	342 nt		3.57	□□□□□ -1.84
CAF16	P43569	YBR012W-A	YBR012W-A	1323 nt		3.57	□□□□□ -1.84
CAF16	P43569	YOR142W-A	YOR142W-A	1323 nt		3.57	□□□□□ -1.84
CAF16	P43569	RPS23B	YPR132W	438 nt		3.57	□□□□□ -1.84
CAF16	P43569	YPR158W-A	YPR158W-A	1323 nt		3.57	□□□□□ -1.84

Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms