Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.9■□□□□ 0.94
MDH1P40925 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.9■□□□□ 0.94
MDH1P40925 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
MDH1P40925 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.9■□□□□ 0.94
MDH1P40925 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
MDH1P40925 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MDH1P40925 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.9■□□□□ 0.94
MDH1P40925 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
MDH1P40925 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
MDH1P40925 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
MDH1P40925 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
MDH1P40925 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MDH1P40925 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MDH1P40925 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.89■□□□□ 0.93
MDH1P40925 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
MDH1P40925 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MDH1P40925 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MDH1P40925 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.89■□□□□ 0.93
MDH1P40925 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.89■□□□□ 0.93
MDH1P40925 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MDH1P40925 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
MDH1P40925 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MDH1P40925 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.89■□□□□ 0.93
MDH1P40925 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
MDH1P40925 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MDH1P40925 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MDH1P40925 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MDH1P40925 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
MDH1P40925 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MDH1P40925 FP700111.2-201ENST00000619190 1892 ntBASIC20.88■□□□□ 0.93
MDH1P40925 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MDH1P40925 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.88■□□□□ 0.93
MDH1P40925 AL034346.1-201ENST00000568244 1277 ntBASIC20.88■□□□□ 0.93
MDH1P40925 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MDH1P40925 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.88■□□□□ 0.93
MDH1P40925 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
MDH1P40925 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.88■□□□□ 0.93
MDH1P40925 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MDH1P40925 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
MDH1P40925 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.87■□□□□ 0.93
MDH1P40925 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MDH1P40925 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.87■□□□□ 0.93
MDH1P40925 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MDH1P40925 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MDH1P40925 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MDH1P40925 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MDH1P40925 BHLHE23-202ENST00000612929 1109 ntBASIC20.87■□□□□ 0.93
MDH1P40925 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
MDH1P40925 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
MDH1P40925 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.87■□□□□ 0.93
MDH1P40925 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.87■□□□□ 0.93
MDH1P40925 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.87■□□□□ 0.93
MDH1P40925 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.87■□□□□ 0.93
MDH1P40925 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MDH1P40925 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.86■□□□□ 0.93
MDH1P40925 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MDH1P40925 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
MDH1P40925 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
MDH1P40925 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MDH1P40925 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MDH1P40925 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.86■□□□□ 0.93
MDH1P40925 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
MDH1P40925 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.86■□□□□ 0.93
MDH1P40925 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
MDH1P40925 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MDH1P40925 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.86■□□□□ 0.93
MDH1P40925 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MDH1P40925 AC125437.2-201ENST00000625180 2167 ntBASIC20.86■□□□□ 0.93
MDH1P40925 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
MDH1P40925 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
MDH1P40925 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MDH1P40925 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.85■□□□□ 0.93
MDH1P40925 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
MDH1P40925 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MDH1P40925 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MDH1P40925 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
MDH1P40925 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.85■□□□□ 0.93
MDH1P40925 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.85■□□□□ 0.93
MDH1P40925 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MDH1P40925 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.85■□□□□ 0.93
MDH1P40925 AC074183.2-201ENST00000623112 922 ntBASIC20.85■□□□□ 0.93
MDH1P40925 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MDH1P40925 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.85■□□□□ 0.93
MDH1P40925 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MDH1P40925 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.85■□□□□ 0.93
MDH1P40925 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.85■□□□□ 0.93
MDH1P40925 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MDH1P40925 AL158211.5-201ENST00000623583 2518 ntBASIC20.84■□□□□ 0.93
MDH1P40925 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.84■□□□□ 0.93
MDH1P40925 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms