Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.05■□□□□ 0.48
GDNFP39905 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDNFP39905 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDNFP39905 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDNFP39905 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDNFP39905 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.05■□□□□ 0.48
GDNFP39905 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.05■□□□□ 0.48
GDNFP39905 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.05■□□□□ 0.48
GDNFP39905 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.05■□□□□ 0.48
GDNFP39905 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
GDNFP39905 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
GDNFP39905 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDNFP39905 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDNFP39905 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GDNFP39905 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GDNFP39905 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.04■□□□□ 0.48
GDNFP39905 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDNFP39905 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDNFP39905 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.04■□□□□ 0.48
GDNFP39905 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.04■□□□□ 0.48
GDNFP39905 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDNFP39905 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDNFP39905 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GDNFP39905 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDNFP39905 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDNFP39905 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.04■□□□□ 0.48
GDNFP39905 AC010525.1-201ENST00000585559 441 ntBASIC18.04■□□□□ 0.48
GDNFP39905 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
GDNFP39905 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GDNFP39905 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDNFP39905 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GDNFP39905 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDNFP39905 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.04■□□□□ 0.48
GDNFP39905 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDNFP39905 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GDNFP39905 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
GDNFP39905 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 AL020996.1-203ENST00000536896 2307 ntBASIC18.03■□□□□ 0.48
GDNFP39905 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 UNC93B3-201ENST00000308076 687 ntBASIC18.03■□□□□ 0.48
GDNFP39905 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.03■□□□□ 0.48
GDNFP39905 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
GDNFP39905 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.03■□□□□ 0.48
GDNFP39905 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.03■□□□□ 0.48
GDNFP39905 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
GDNFP39905 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
GDNFP39905 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
GDNFP39905 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDNFP39905 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.03■□□□□ 0.48
GDNFP39905 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GDNFP39905 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.02■□□□□ 0.48
GDNFP39905 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDNFP39905 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
GDNFP39905 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
GDNFP39905 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
GDNFP39905 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GDNFP39905 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GDNFP39905 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.02■□□□□ 0.48
GDNFP39905 DUX4L19-201ENST00000557448 1267 ntBASIC18.02■□□□□ 0.48
GDNFP39905 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.02■□□□□ 0.48
GDNFP39905 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDNFP39905 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
GDNFP39905 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
GDNFP39905 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GDNFP39905 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
GDNFP39905 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.47
GDNFP39905 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
GDNFP39905 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
GDNFP39905 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
GDNFP39905 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.02■□□□□ 0.47
GDNFP39905 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.01■□□□□ 0.47
GDNFP39905 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.01■□□□□ 0.47
GDNFP39905 PLK5-205ENST00000642079 1969 ntBASIC18.01■□□□□ 0.47
GDNFP39905 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDNFP39905 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
GDNFP39905 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GDNFP39905 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
GDNFP39905 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GDNFP39905 AL138724.1-201ENST00000606771 1088 ntBASIC18.01■□□□□ 0.47
GDNFP39905 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.01■□□□□ 0.47
GDNFP39905 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
GDNFP39905 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.01■□□□□ 0.47
GDNFP39905 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GDNFP39905 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.01■□□□□ 0.47
GDNFP39905 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.01■□□□□ 0.47
GDNFP39905 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
GDNFP39905 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
GDNFP39905 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms