Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL15A1P39059 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL15A1P39059 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL15A1P39059 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC26.55■■□□□ 1.84
COL15A1P39059 AL589743.5-201ENST00000616611 1050 ntBASIC26.55■■□□□ 1.84
COL15A1P39059 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.55■■□□□ 1.84
COL15A1P39059 C11orf96-202ENST00000528572 1834 ntBASIC26.55■■□□□ 1.84
COL15A1P39059 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL15A1P39059 AC026471.6-201ENST00000622954 1905 ntBASIC26.54■■□□□ 1.84
COL15A1P39059 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.54■■□□□ 1.84
COL15A1P39059 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL15A1P39059 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL15A1P39059 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL15A1P39059 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.54■■□□□ 1.84
COL15A1P39059 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
COL15A1P39059 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL15A1P39059 MCRIP2P1-201ENST00000394346 511 ntBASIC26.54■■□□□ 1.84
COL15A1P39059 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
COL15A1P39059 PNMA6B-201ENST00000538162 1200 ntBASIC26.54■■□□□ 1.84
COL15A1P39059 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.54■■□□□ 1.84
COL15A1P39059 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC26.54■■□□□ 1.84
COL15A1P39059 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.54■■□□□ 1.84
COL15A1P39059 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL15A1P39059 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL15A1P39059 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL15A1P39059 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.53■■□□□ 1.84
COL15A1P39059 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL15A1P39059 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
COL15A1P39059 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.53■■□□□ 1.84
COL15A1P39059 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL15A1P39059 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL15A1P39059 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.53■■□□□ 1.84
COL15A1P39059 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL15A1P39059 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
COL15A1P39059 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
COL15A1P39059 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL15A1P39059 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL15A1P39059 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
COL15A1P39059 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL15A1P39059 UBE2SP1-201ENST00000450587 669 ntBASIC26.52■■□□□ 1.84
COL15A1P39059 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL15A1P39059 RNF121-214ENST00000533380 870 ntTSL 3 BASIC26.52■■□□□ 1.84
COL15A1P39059 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL15A1P39059 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC26.52■■□□□ 1.84
COL15A1P39059 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL15A1P39059 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
COL15A1P39059 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL15A1P39059 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC26.51■■□□□ 1.83
COL15A1P39059 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL15A1P39059 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.51■■□□□ 1.83
COL15A1P39059 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.51■■□□□ 1.83
COL15A1P39059 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
COL15A1P39059 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
COL15A1P39059 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC26.51■■□□□ 1.83
COL15A1P39059 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.51■■□□□ 1.83
COL15A1P39059 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL15A1P39059 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
COL15A1P39059 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC26.51■■□□□ 1.83
COL15A1P39059 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
COL15A1P39059 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL15A1P39059 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL15A1P39059 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.5■■□□□ 1.83
COL15A1P39059 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
COL15A1P39059 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL15A1P39059 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC26.5■■□□□ 1.83
COL15A1P39059 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.5■■□□□ 1.83
COL15A1P39059 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.5■■□□□ 1.83
COL15A1P39059 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.5■■□□□ 1.83
COL15A1P39059 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL15A1P39059 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL15A1P39059 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL15A1P39059 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.5■■□□□ 1.83
COL15A1P39059 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
COL15A1P39059 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL15A1P39059 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.49■■□□□ 1.83
COL15A1P39059 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.49■■□□□ 1.83
COL15A1P39059 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC26.49■■□□□ 1.83
COL15A1P39059 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.49■■□□□ 1.83
COL15A1P39059 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC26.49■■□□□ 1.83
COL15A1P39059 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC26.49■■□□□ 1.83
COL15A1P39059 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
COL15A1P39059 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL15A1P39059 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
COL15A1P39059 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
COL15A1P39059 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL15A1P39059 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL15A1P39059 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL15A1P39059 AC092368.3-202ENST00000574180 1591 ntBASIC26.48■■□□□ 1.83
COL15A1P39059 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL15A1P39059 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
COL15A1P39059 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
COL15A1P39059 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL15A1P39059 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL15A1P39059 SAPCD2P1-201ENST00000395413 1184 ntBASIC26.47■■□□□ 1.83
COL15A1P39059 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.47■■□□□ 1.83
COL15A1P39059 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL15A1P39059 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.47■■□□□ 1.83
COL15A1P39059 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL15A1P39059 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
COL15A1P39059 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms