Protein–RNA interactions for Protein: P38842

YHR140W, UPF0641 membrane protein YHR140W, yeastyeast

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YHR140WP38842 ERG28YER044C 447 nt1.57□□□□□ -2.16
YHR140WP38842 YGL218WYGL218W 651 nt1.57□□□□□ -2.16
YHR140WP38842 VEL1YGL258W 621 nt1.57□□□□□ -2.16
YHR140WP38842 MTM1YGR257C 1101 nt1.57□□□□□ -2.16
YHR140WP38842 YJR020WYJR020W 333 nt1.57□□□□□ -2.16
YHR140WP38842 DUG3YNL191W 1074 nt1.57□□□□□ -2.16
YHR140WP38842 YBL094CYBL094C 333 nt1.57□□□□□ -2.16
YHR140WP38842 FIG1YBR040W 897 nt1.57□□□□□ -2.16
YHR140WP38842 PUF4YGL014W 2667 nt1.57□□□□□ -2.16
YHR140WP38842 AGC1YPR021C 2709 nt1.57□□□□□ -2.16
YHR140WP38842 NPR3YHL023C 3441 nt1.57□□□□□ -2.16
YHR140WP38842 VPS8YAL002W 3825 nt1.57□□□□□ -2.16
YHR140WP38842 HOP1YIL072W 1818 nt1.56□□□□□ -2.16
YHR140WP38842 JIP5YPR169W 1479 nt1.56□□□□□ -2.16
YHR140WP38842 ARK1YNL020C 1917 nt1.56□□□□□ -2.16
YHR140WP38842 VTC3YPL019C 2508 nt1.56□□□□□ -2.16
YHR140WP38842 TCA17YEL048C 459 nt1.56□□□□□ -2.16
YHR140WP38842 COX13YGL191W 390 nt1.56□□□□□ -2.16
YHR140WP38842 ACB1YGR037C 264 nt1.56□□□□□ -2.16
YHR140WP38842 SPO16YHR153C 597 nt1.56□□□□□ -2.16
YHR140WP38842 PAU14YIL176C 363 nt1.56□□□□□ -2.16
YHR140WP38842 PAU1YJL223C 363 nt1.56□□□□□ -2.16
YHR140WP38842 RLP24YLR009W 600 nt1.56□□□□□ -2.16
YHR140WP38842 SED5YLR026C 1023 nt1.56□□□□□ -2.16
YHR140WP38842 NYV1YLR093C 762 nt1.56□□□□□ -2.16
YHR140WP38842 BET5YML077W 480 nt1.56□□□□□ -2.16
YHR140WP38842 MSS18YPR134W 807 nt1.56□□□□□ -2.16
YHR140WP38842 PSK2YOL045W 3306 nt1.55□□□□□ -2.16
YHR140WP38842 IRC20YLR247C 4671 nt1.55□□□□□ -2.16
YHR140WP38842 MUB1YMR100W 1863 nt1.55□□□□□ -2.16
YHR140WP38842 SEC4YFL005W 648 nt1.55□□□□□ -2.16
YHR140WP38842 RGM1YMR182C 636 nt1.55□□□□□ -2.16
YHR140WP38842 YNL035CYNL035C 1170 nt1.55□□□□□ -2.16
YHR140WP38842 MFA2YNL145W 117 nt1.55□□□□□ -2.16
YHR140WP38842 ESF2YNR054C 951 nt1.55□□□□□ -2.16
YHR140WP38842 REG2YBR050C 1017 nt1.55□□□□□ -2.16
YHR140WP38842 MF(ALPHA)1YPL187W 498 nt1.55□□□□□ -2.16
YHR140WP38842 FUS1YCL027W 1539 nt1.55□□□□□ -2.16
YHR140WP38842 BUD2YKL092C 3315 nt1.54□□□□□ -2.16
YHR140WP38842 SKP2YNL311C 2292 nt1.54□□□□□ -2.16
YHR140WP38842 COBQ0105 1158 nt1.54□□□□□ -2.16
YHR140WP38842 DSE2YHR143W 978 nt1.54□□□□□ -2.16
YHR140WP38842 YKR075CYKR075C 924 nt1.54□□□□□ -2.16
YHR140WP38842 YAP7YOL028C 738 nt1.54□□□□□ -2.16
YHR140WP38842 MUD1YBR119W 897 nt1.54□□□□□ -2.16
YHR140WP38842 DIS3YOL021C 3006 nt1.54□□□□□ -2.16
YHR140WP38842 SLN1YIL147C 3663 nt1.54□□□□□ -2.16
YHR140WP38842 DFG16YOR030W 1860 nt1.54□□□□□ -2.16
YHR140WP38842 MYO2YOR326W 4725 nt1.54□□□□□ -2.16
YHR140WP38842 tC(GCA)BtC(GCA)B 72 nt1.53□□□□□ -2.16
YHR140WP38842 tC(GCA)GtC(GCA)G 72 nt1.53□□□□□ -2.16
YHR140WP38842 tC(GCA)P1tC(GCA)P1 72 nt1.53□□□□□ -2.16
YHR140WP38842 tC(GCA)P2tC(GCA)P2 72 nt1.53□□□□□ -2.16
YHR140WP38842 DIG2YDR480W 972 nt1.53□□□□□ -2.16
YHR140WP38842 EMI1YDR512C 564 nt1.53□□□□□ -2.16
YHR140WP38842 YMR31YFR049W 372 nt1.53□□□□□ -2.16
YHR140WP38842 UPF3YGR072W 1164 nt1.53□□□□□ -2.16
YHR140WP38842 VTI1YMR197C 654 nt1.53□□□□□ -2.16
YHR140WP38842 NGL1YOL042W 1092 nt1.53□□□□□ -2.16
YHR140WP38842 DSE3YOR264W 1293 nt1.53□□□□□ -2.16
YHR140WP38842 COA2YPL189C-A 207 nt1.53□□□□□ -2.16
YHR140WP38842 APA1YCL050C 966 nt1.53□□□□□ -2.16
YHR140WP38842 SET2YJL168C 2202 nt1.52□□□□□ -2.17
YHR140WP38842 CET1YPL228W 1650 nt1.52□□□□□ -2.17
YHR140WP38842 BPH1YCR032W 6504 nt1.52□□□□□ -2.17
YHR140WP38842 snR68snR68 136 nt1.52□□□□□ -2.17
YHR140WP38842 YIL058WYIL058W 285 nt1.52□□□□□ -2.17
YHR140WP38842 CSM2YIL132C 642 nt1.52□□□□□ -2.17
YHR140WP38842 RPA34YJL148W 702 nt1.52□□□□□ -2.17
YHR140WP38842 ARR2YPR200C 393 nt1.52□□□□□ -2.17
YHR140WP38842 REV1YOR346W 2958 nt1.52□□□□□ -2.17
YHR140WP38842 RNH70YGR276C 1662 nt1.51□□□□□ -2.17
YHR140WP38842 RUD3YOR216C 1455 nt1.51□□□□□ -2.17
YHR140WP38842 RRP12YPL012W 3687 nt1.51□□□□□ -2.17
YHR140WP38842 GDI1YER136W 1356 nt1.51□□□□□ -2.17
YHR140WP38842 NUF2YOL069W 1356 nt1.51□□□□□ -2.17
YHR140WP38842 IRC4YDR540C 540 nt1.51□□□□□ -2.17
YHR140WP38842 AAD16YFL057C 459 nt1.51□□□□□ -2.17
YHR140WP38842 YGR226CYGR226C 210 nt1.51□□□□□ -2.17
YHR140WP38842 UBC12YLR306W 567 nt1.51□□□□□ -2.17
YHR140WP38842 MCT1YOR221C 1083 nt1.51□□□□□ -2.17
YHR140WP38842 YPL142CYPL142C 318 nt1.51□□□□□ -2.17
YHR140WP38842 LRE1YCL051W 1752 nt1.51□□□□□ -2.17
YHR140WP38842 VPH1YOR270C 2523 nt1.5□□□□□ -2.17
YHR140WP38842 RLF2YPR018W 1821 nt1.5□□□□□ -2.17
YHR140WP38842 VAC8YEL013W 1737 nt1.5□□□□□ -2.17
YHR140WP38842 YER107W-AYER107W-A 321 nt1.5□□□□□ -2.17
YHR140WP38842 YER172C-AYER172C-A 381 nt1.5□□□□□ -2.17
YHR140WP38842 RPS22BYLR367W 393 nt1.5□□□□□ -2.17
YHR140WP38842 RAD10YML095C 633 nt1.5□□□□□ -2.17
YHR140WP38842 CCL1YPR025C 1182 nt1.5□□□□□ -2.17
YHR140WP38842 snR191snR191 274 nt1.5□□□□□ -2.17
YHR140WP38842 CFT2YLR115W 2580 nt1.5□□□□□ -2.17
YHR140WP38842 HER1YOR227W 3741 nt1.49□□□□□ -2.17
YHR140WP38842 VPS41YDR080W 2979 nt1.49□□□□□ -2.17
YHR140WP38842 RAV2YDR202C 1056 nt1.49□□□□□ -2.17
YHR140WP38842 YER189WYER189W 369 nt1.49□□□□□ -2.17
YHR140WP38842 tT(UGU)HtT(UGU)H 72 nt1.49□□□□□ -2.17
YHR140WP38842 YHR210CYHR210C 1026 nt1.49□□□□□ -2.17
YHR140WP38842 YAP5YIR018W 738 nt1.49□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 20.5 ms