Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPA3P35244 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPA3P35244 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.98■□□□□ 0.95
RPA3P35244 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
RPA3P35244 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.98■□□□□ 0.95
RPA3P35244 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
RPA3P35244 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPA3P35244 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.97■□□□□ 0.95
RPA3P35244 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPA3P35244 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPA3P35244 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RPA3P35244 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPA3P35244 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.97■□□□□ 0.95
RPA3P35244 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPA3P35244 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RPA3P35244 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPA3P35244 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
RPA3P35244 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPA3P35244 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPA3P35244 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.97■□□□□ 0.95
RPA3P35244 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RPA3P35244 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPA3P35244 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.97■□□□□ 0.95
RPA3P35244 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.97■□□□□ 0.95
RPA3P35244 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPA3P35244 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.97■□□□□ 0.95
RPA3P35244 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RPA3P35244 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RPA3P35244 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RPA3P35244 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPA3P35244 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPA3P35244 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPA3P35244 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPA3P35244 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.96■□□□□ 0.95
RPA3P35244 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RPA3P35244 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPA3P35244 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.96■□□□□ 0.95
RPA3P35244 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.96■□□□□ 0.95
RPA3P35244 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.96■□□□□ 0.95
RPA3P35244 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPA3P35244 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPA3P35244 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.96■□□□□ 0.95
RPA3P35244 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.96■□□□□ 0.95
RPA3P35244 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPA3P35244 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPA3P35244 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPA3P35244 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.96■□□□□ 0.95
RPA3P35244 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.96■□□□□ 0.95
RPA3P35244 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPA3P35244 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.95■□□□□ 0.94
RPA3P35244 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
RPA3P35244 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPA3P35244 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPA3P35244 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPA3P35244 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPA3P35244 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.95■□□□□ 0.94
RPA3P35244 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPA3P35244 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPA3P35244 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.95■□□□□ 0.94
RPA3P35244 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPA3P35244 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPA3P35244 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPA3P35244 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
RPA3P35244 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.95■□□□□ 0.94
RPA3P35244 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.94■□□□□ 0.94
RPA3P35244 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.94■□□□□ 0.94
RPA3P35244 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.94■□□□□ 0.94
RPA3P35244 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.94■□□□□ 0.94
RPA3P35244 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.94■□□□□ 0.94
RPA3P35244 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.94■□□□□ 0.94
RPA3P35244 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPA3P35244 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPA3P35244 MIR572-201ENST00000384983 95 ntBASIC20.94■□□□□ 0.94
RPA3P35244 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPA3P35244 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.94■□□□□ 0.94
RPA3P35244 AC027702.1-201ENST00000563810 1770 ntBASIC20.94■□□□□ 0.94
RPA3P35244 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.94■□□□□ 0.94
RPA3P35244 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPA3P35244 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPA3P35244 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPA3P35244 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPA3P35244 RNF165-205ENST00000588679 2904 ntBASIC20.94■□□□□ 0.94
RPA3P35244 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPA3P35244 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.94■□□□□ 0.94
RPA3P35244 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPA3P35244 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.93■□□□□ 0.94
RPA3P35244 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPA3P35244 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPA3P35244 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPA3P35244 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPA3P35244 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPA3P35244 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.93■□□□□ 0.94
RPA3P35244 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.93■□□□□ 0.94
RPA3P35244 AC105233.4-201ENST00000642045 216 ntBASIC20.93■□□□□ 0.94
RPA3P35244 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPA3P35244 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPA3P35244 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPA3P35244 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RPA3P35244 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.93■□□□□ 0.94
RPA3P35244 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms