Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN7P35236 IRS3P-201ENST00000223076 1006 ntBASIC21.51■■□□□ 1.03
PTPN7P35236 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN7P35236 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN7P35236 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN7P35236 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.51■■□□□ 1.03
PTPN7P35236 AC005837.3-201ENST00000612163 286 ntBASIC21.51■■□□□ 1.03
PTPN7P35236 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.51■■□□□ 1.03
PTPN7P35236 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN7P35236 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN7P35236 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN7P35236 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN7P35236 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN7P35236 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN7P35236 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN7P35236 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
PTPN7P35236 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN7P35236 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN7P35236 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN7P35236 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN7P35236 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.5■■□□□ 1.03
PTPN7P35236 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PTPN7P35236 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN7P35236 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.5■■□□□ 1.03
PTPN7P35236 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.5■■□□□ 1.03
PTPN7P35236 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.5■■□□□ 1.03
PTPN7P35236 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN7P35236 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN7P35236 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN7P35236 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN7P35236 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PTPN7P35236 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN7P35236 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
PTPN7P35236 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.49■■□□□ 1.03
PTPN7P35236 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.49■■□□□ 1.03
PTPN7P35236 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PTPN7P35236 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN7P35236 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.49■■□□□ 1.03
PTPN7P35236 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN7P35236 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.49■■□□□ 1.03
PTPN7P35236 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
PTPN7P35236 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.49■■□□□ 1.03
PTPN7P35236 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.49■■□□□ 1.03
PTPN7P35236 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN7P35236 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN7P35236 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN7P35236 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN7P35236 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.49■■□□□ 1.03
PTPN7P35236 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN7P35236 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.49■■□□□ 1.03
PTPN7P35236 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.49■■□□□ 1.03
PTPN7P35236 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN7P35236 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN7P35236 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN7P35236 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
PTPN7P35236 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN7P35236 KRT16P2-201ENST00000414673 1423 ntBASIC21.48■■□□□ 1.03
PTPN7P35236 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN7P35236 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN7P35236 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN7P35236 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
PTPN7P35236 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN7P35236 AC105265.2-201ENST00000467189 838 ntBASIC21.48■■□□□ 1.03
PTPN7P35236 AC027702.1-201ENST00000563810 1770 ntBASIC21.48■■□□□ 1.03
PTPN7P35236 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.48■■□□□ 1.03
PTPN7P35236 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN7P35236 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN7P35236 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
PTPN7P35236 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.47■■□□□ 1.03
PTPN7P35236 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
PTPN7P35236 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN7P35236 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN7P35236 AC010141.2-201ENST00000452426 721 ntBASIC21.47■■□□□ 1.03
PTPN7P35236 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN7P35236 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PTPN7P35236 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN7P35236 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN7P35236 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.47■■□□□ 1.03
PTPN7P35236 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PTPN7P35236 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN7P35236 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PTPN7P35236 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.47■■□□□ 1.03
PTPN7P35236 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PTPN7P35236 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN7P35236 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PTPN7P35236 SLC25A24-204ENST00000569674 2357 ntBASIC21.46■■□□□ 1.03
PTPN7P35236 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
PTPN7P35236 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN7P35236 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.46■■□□□ 1.03
PTPN7P35236 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN7P35236 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.46■■□□□ 1.03
PTPN7P35236 RARRES2P11-201ENST00000635158 484 ntBASIC21.46■■□□□ 1.03
PTPN7P35236 AC092667.1-201ENST00000434301 2586 ntBASIC21.46■■□□□ 1.03
PTPN7P35236 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN7P35236 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN7P35236 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN7P35236 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
PTPN7P35236 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PTPN7P35236 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.03
PTPN7P35236 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms