Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LMO1P25800 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.45■□□□□ 0.38
LMO1P25800 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMO1P25800 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMO1P25800 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LMO1P25800 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.44■□□□□ 0.38
LMO1P25800 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.44■□□□□ 0.38
LMO1P25800 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.44■□□□□ 0.38
LMO1P25800 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.44■□□□□ 0.38
LMO1P25800 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.44■□□□□ 0.38
LMO1P25800 ZNRF2P3-201ENST00000424200 374 ntBASIC17.44■□□□□ 0.38
LMO1P25800 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.44■□□□□ 0.38
LMO1P25800 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.44■□□□□ 0.38
LMO1P25800 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.44■□□□□ 0.38
LMO1P25800 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.44■□□□□ 0.38
LMO1P25800 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LMO1P25800 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMO1P25800 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.43■□□□□ 0.38
LMO1P25800 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LMO1P25800 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.43■□□□□ 0.38
LMO1P25800 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LMO1P25800 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.43■□□□□ 0.38
LMO1P25800 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.43■□□□□ 0.38
LMO1P25800 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.43■□□□□ 0.38
LMO1P25800 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 KRT16P2-201ENST00000414673 1423 ntBASIC17.43■□□□□ 0.38
LMO1P25800 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.43■□□□□ 0.38
LMO1P25800 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.43■□□□□ 0.38
LMO1P25800 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMO1P25800 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 AC006128.1-201ENST00000624704 1661 ntBASIC17.42■□□□□ 0.38
LMO1P25800 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.42■□□□□ 0.38
LMO1P25800 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 AC121338.2-201ENST00000622535 1744 ntBASIC17.42■□□□□ 0.38
LMO1P25800 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LMO1P25800 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.42■□□□□ 0.38
LMO1P25800 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LMO1P25800 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LMO1P25800 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.42■□□□□ 0.38
LMO1P25800 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.42■□□□□ 0.38
LMO1P25800 AC010141.2-201ENST00000452426 721 ntBASIC17.42■□□□□ 0.38
LMO1P25800 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.42■□□□□ 0.38
LMO1P25800 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.42■□□□□ 0.38
LMO1P25800 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.42■□□□□ 0.38
LMO1P25800 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.42■□□□□ 0.38
LMO1P25800 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.42■□□□□ 0.38
LMO1P25800 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 PLK5-205ENST00000642079 1969 ntBASIC17.42■□□□□ 0.38
LMO1P25800 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.42■□□□□ 0.38
LMO1P25800 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LMO1P25800 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMO1P25800 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
LMO1P25800 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO1P25800 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO1P25800 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.41■□□□□ 0.38
LMO1P25800 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.41■□□□□ 0.38
LMO1P25800 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LMO1P25800 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LMO1P25800 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.41■□□□□ 0.38
LMO1P25800 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMO1P25800 DUX4L2-201ENST00000561772 1275 ntBASIC17.41■□□□□ 0.38
LMO1P25800 CCDC92B-201ENST00000575506 885 ntBASIC17.41■□□□□ 0.38
LMO1P25800 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms