Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.46■□□□□ 0.39
CXCL3P19876 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.46■□□□□ 0.39
CXCL3P19876 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.46■□□□□ 0.39
CXCL3P19876 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL3P19876 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CXCL3P19876 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
CXCL3P19876 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.45■□□□□ 0.38
CXCL3P19876 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL3P19876 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CXCL3P19876 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.45■□□□□ 0.38
CXCL3P19876 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL3P19876 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCL3P19876 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL3P19876 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CXCL3P19876 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.45■□□□□ 0.38
CXCL3P19876 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL3P19876 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCL3P19876 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL3P19876 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CXCL3P19876 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL3P19876 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.45■□□□□ 0.38
CXCL3P19876 OR7E47P-201ENST00000546390 1422 ntBASIC17.45■□□□□ 0.38
CXCL3P19876 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL3P19876 TCF3P1-201ENST00000423021 1937 ntBASIC17.45■□□□□ 0.38
CXCL3P19876 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CXCL3P19876 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.44■□□□□ 0.38
CXCL3P19876 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL3P19876 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL3P19876 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CXCL3P19876 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CXCL3P19876 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.44■□□□□ 0.38
CXCL3P19876 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.44■□□□□ 0.38
CXCL3P19876 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.44■□□□□ 0.38
CXCL3P19876 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CXCL3P19876 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL3P19876 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL3P19876 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL3P19876 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCL3P19876 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.44■□□□□ 0.38
CXCL3P19876 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL3P19876 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL3P19876 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL3P19876 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.44■□□□□ 0.38
CXCL3P19876 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CXCL3P19876 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.43■□□□□ 0.38
CXCL3P19876 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CXCL3P19876 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CXCL3P19876 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
CXCL3P19876 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCL3P19876 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCL3P19876 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CXCL3P19876 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCL3P19876 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.43■□□□□ 0.38
CXCL3P19876 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.43■□□□□ 0.38
CXCL3P19876 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CXCL3P19876 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.42■□□□□ 0.38
CXCL3P19876 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CXCL3P19876 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 AC121338.2-201ENST00000622535 1744 ntBASIC17.42■□□□□ 0.38
CXCL3P19876 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.42■□□□□ 0.38
CXCL3P19876 HSD17B1P1-201ENST00000590052 955 ntBASIC17.42■□□□□ 0.38
CXCL3P19876 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CXCL3P19876 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.42■□□□□ 0.38
CXCL3P19876 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.42■□□□□ 0.38
CXCL3P19876 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL3P19876 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.42■□□□□ 0.38
CXCL3P19876 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL3P19876 AC007613.1-201ENST00000572811 2597 ntBASIC17.41■□□□□ 0.38
CXCL3P19876 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CXCL3P19876 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL3P19876 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CXCL3P19876 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.41■□□□□ 0.38
CXCL3P19876 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CXCL3P19876 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CXCL3P19876 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL3P19876 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.41■□□□□ 0.38
CXCL3P19876 AC120024.1-201ENST00000562672 995 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms