Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL11A2P13942 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
COL11A2P13942 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.76■■□□□ 1.71
COL11A2P13942 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
COL11A2P13942 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL11A2P13942 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL11A2P13942 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL11A2P13942 AC087633.2-202ENST00000565166 1439 ntBASIC25.75■■□□□ 1.71
COL11A2P13942 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL11A2P13942 KRT18P68-201ENST00000392293 1000 ntBASIC25.75■■□□□ 1.71
COL11A2P13942 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL11A2P13942 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL11A2P13942 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
COL11A2P13942 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL11A2P13942 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL11A2P13942 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.74■■□□□ 1.71
COL11A2P13942 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
COL11A2P13942 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
COL11A2P13942 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL11A2P13942 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.74■■□□□ 1.71
COL11A2P13942 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.74■■□□□ 1.71
COL11A2P13942 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC25.74■■□□□ 1.71
COL11A2P13942 KRT18P21-201ENST00000515767 1272 ntBASIC25.74■■□□□ 1.71
COL11A2P13942 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.74■■□□□ 1.71
COL11A2P13942 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.74■■□□□ 1.71
COL11A2P13942 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL11A2P13942 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.74■■□□□ 1.71
COL11A2P13942 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL11A2P13942 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.74■■□□□ 1.71
COL11A2P13942 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL11A2P13942 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL11A2P13942 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
COL11A2P13942 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
COL11A2P13942 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.74■■□□□ 1.71
COL11A2P13942 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL11A2P13942 MTDHP1-201ENST00000605323 784 ntBASIC25.74■■□□□ 1.71
COL11A2P13942 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL11A2P13942 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL11A2P13942 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL11A2P13942 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL11A2P13942 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC25.73■■□□□ 1.71
COL11A2P13942 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
COL11A2P13942 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL11A2P13942 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC25.73■■□□□ 1.71
COL11A2P13942 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.73■■□□□ 1.71
COL11A2P13942 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
COL11A2P13942 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A2P13942 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A2P13942 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
COL11A2P13942 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A2P13942 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A2P13942 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A2P13942 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.72■■□□□ 1.71
COL11A2P13942 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A2P13942 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.72■■□□□ 1.71
COL11A2P13942 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.72■■□□□ 1.71
COL11A2P13942 PPOX-219ENST00000544598 813 ntTSL 2 BASIC25.72■■□□□ 1.71
COL11A2P13942 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
COL11A2P13942 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC25.72■■□□□ 1.71
COL11A2P13942 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC25.72■■□□□ 1.71
COL11A2P13942 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC25.72■■□□□ 1.71
COL11A2P13942 AL049637.2-201ENST00000641778 930 ntBASIC25.72■■□□□ 1.71
COL11A2P13942 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A2P13942 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A2P13942 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
COL11A2P13942 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A2P13942 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.72■■□□□ 1.71
COL11A2P13942 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A2P13942 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.72■■□□□ 1.71
COL11A2P13942 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.72■■□□□ 1.71
COL11A2P13942 AC010542.4-201ENST00000563151 1910 ntBASIC25.72■■□□□ 1.71
COL11A2P13942 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL11A2P13942 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A2P13942 AC239809.2-201ENST00000415381 517 ntBASIC25.71■■□□□ 1.71
COL11A2P13942 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.71■■□□□ 1.71
COL11A2P13942 AC133681.1-201ENST00000465482 601 ntBASIC25.71■■□□□ 1.71
COL11A2P13942 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.71■■□□□ 1.71
COL11A2P13942 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A2P13942 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.71■■□□□ 1.71
COL11A2P13942 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A2P13942 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A2P13942 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
COL11A2P13942 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
COL11A2P13942 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A2P13942 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A2P13942 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A2P13942 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A2P13942 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.71■■□□□ 1.71
COL11A2P13942 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A2P13942 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL11A2P13942 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL11A2P13942 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL11A2P13942 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
COL11A2P13942 AC087499.1-201ENST00000418141 1075 ntBASIC25.7■■□□□ 1.7
COL11A2P13942 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.7■■□□□ 1.7
COL11A2P13942 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
COL11A2P13942 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
COL11A2P13942 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL11A2P13942 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL11A2P13942 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms