Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 Z99916.2-201ENST00000604037 246 ntBASIC21.16■□□□□ 0.98
CHRNB1P11230 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB1P11230 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHRNB1P11230 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB1P11230 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
CHRNB1P11230 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB1P11230 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB1P11230 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB1P11230 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB1P11230 KRT18P68-201ENST00000392293 1000 ntBASIC21.15■□□□□ 0.98
CHRNB1P11230 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB1P11230 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.15■□□□□ 0.98
CHRNB1P11230 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.15■□□□□ 0.98
CHRNB1P11230 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CHRNB1P11230 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB1P11230 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHRNB1P11230 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
CHRNB1P11230 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHRNB1P11230 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CHRNB1P11230 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB1P11230 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB1P11230 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.14■□□□□ 0.97
CHRNB1P11230 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB1P11230 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB1P11230 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB1P11230 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB1P11230 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.14■□□□□ 0.97
CHRNB1P11230 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.14■□□□□ 0.97
CHRNB1P11230 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.14■□□□□ 0.97
CHRNB1P11230 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.14■□□□□ 0.97
CHRNB1P11230 AC233263.1-201ENST00000578059 224 ntBASIC21.14■□□□□ 0.97
CHRNB1P11230 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.14■□□□□ 0.97
CHRNB1P11230 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB1P11230 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB1P11230 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.14■□□□□ 0.97
CHRNB1P11230 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB1P11230 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHRNB1P11230 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB1P11230 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.13■□□□□ 0.97
CHRNB1P11230 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB1P11230 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHRNB1P11230 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB1P11230 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.13■□□□□ 0.97
CHRNB1P11230 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.13■□□□□ 0.97
CHRNB1P11230 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.13■□□□□ 0.97
CHRNB1P11230 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.13■□□□□ 0.97
CHRNB1P11230 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB1P11230 AC073912.3-201ENST00000624414 853 ntBASIC21.13■□□□□ 0.97
CHRNB1P11230 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB1P11230 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHRNB1P11230 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CHRNB1P11230 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.13■□□□□ 0.97
CHRNB1P11230 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB1P11230 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB1P11230 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB1P11230 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRNB1P11230 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB1P11230 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB1P11230 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.12■□□□□ 0.97
CHRNB1P11230 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRNB1P11230 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.12■□□□□ 0.97
CHRNB1P11230 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CHRNB1P11230 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.12■□□□□ 0.97
CHRNB1P11230 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.12■□□□□ 0.97
CHRNB1P11230 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.12■□□□□ 0.97
CHRNB1P11230 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.12■□□□□ 0.97
CHRNB1P11230 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRNB1P11230 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.12■□□□□ 0.97
CHRNB1P11230 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNB1P11230 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNB1P11230 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNB1P11230 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNB1P11230 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.11■□□□□ 0.97
CHRNB1P11230 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNB1P11230 ECEL1P3-201ENST00000427961 737 ntBASIC21.11■□□□□ 0.97
CHRNB1P11230 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRNB1P11230 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.11■□□□□ 0.97
CHRNB1P11230 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNB1P11230 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CHRNB1P11230 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRNB1P11230 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRNB1P11230 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.11■□□□□ 0.97
CHRNB1P11230 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.11■□□□□ 0.97
CHRNB1P11230 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CHRNB1P11230 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNB1P11230 AC092053.2-201ENST00000640557 1818 ntBASIC21.11■□□□□ 0.97
CHRNB1P11230 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNB1P11230 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNB1P11230 AL024507.2-201ENST00000606070 2574 ntBASIC21.1■□□□□ 0.97
CHRNB1P11230 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CHRNB1P11230 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CHRNB1P11230 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNB1P11230 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.1■□□□□ 0.97
CHRNB1P11230 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNB1P11230 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.1■□□□□ 0.97
CHRNB1P11230 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CHRNB1P11230 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.1■□□□□ 0.97
CHRNB1P11230 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.1■□□□□ 0.97
CHRNB1P11230 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.1■□□□□ 0.97
CHRNB1P11230 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms