Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
RARAP10276 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.8■■□□□ 1.08
RARAP10276 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.8■■□□□ 1.08
RARAP10276 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RARAP10276 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RARAP10276 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.8■■□□□ 1.08
RARAP10276 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RARAP10276 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RARAP10276 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RARAP10276 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
RARAP10276 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RARAP10276 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RARAP10276 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RARAP10276 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RARAP10276 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RARAP10276 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RARAP10276 AC061975.6-201ENST00000579045 1553 ntBASIC21.79■■□□□ 1.08
RARAP10276 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RARAP10276 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RARAP10276 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RARAP10276 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RARAP10276 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RARAP10276 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RARAP10276 TERF1P2-201ENST00000583350 1212 ntBASIC21.79■■□□□ 1.08
RARAP10276 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.79■■□□□ 1.08
RARAP10276 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RARAP10276 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RARAP10276 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RARAP10276 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.78■■□□□ 1.08
RARAP10276 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.78■■□□□ 1.08
RARAP10276 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RARAP10276 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.78■■□□□ 1.08
RARAP10276 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.78■■□□□ 1.08
RARAP10276 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RARAP10276 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RARAP10276 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RARAP10276 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RARAP10276 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.78■■□□□ 1.08
RARAP10276 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RARAP10276 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
RARAP10276 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RARAP10276 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
RARAP10276 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RARAP10276 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.77■■□□□ 1.08
RARAP10276 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.77■■□□□ 1.08
RARAP10276 CCDC92B-201ENST00000575506 885 ntBASIC21.77■■□□□ 1.08
RARAP10276 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.77■■□□□ 1.08
RARAP10276 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RARAP10276 RNF165-205ENST00000588679 2904 ntBASIC21.77■■□□□ 1.08
RARAP10276 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RARAP10276 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RARAP10276 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RARAP10276 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RARAP10276 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
RARAP10276 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
RARAP10276 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.76■■□□□ 1.07
RARAP10276 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.76■■□□□ 1.07
RARAP10276 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.76■■□□□ 1.07
RARAP10276 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RARAP10276 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.76■■□□□ 1.07
RARAP10276 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RARAP10276 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RARAP10276 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.75■■□□□ 1.07
RARAP10276 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
RARAP10276 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.75■■□□□ 1.07
RARAP10276 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.75■■□□□ 1.07
RARAP10276 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RARAP10276 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.75■■□□□ 1.07
RARAP10276 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.75■■□□□ 1.07
RARAP10276 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.75■■□□□ 1.07
RARAP10276 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.75■■□□□ 1.07
RARAP10276 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.75■■□□□ 1.07
RARAP10276 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RARAP10276 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RARAP10276 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms