Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 HUL5YGL141W 2733 nt1.75□□□□□ -2.13
RPL40BP0CH09 AGE1YDR524C 1449 nt1.74□□□□□ -2.13
RPL40BP0CH09 FIG4YNL325C 2640 nt1.74□□□□□ -2.13
RPL40BP0CH09 STE24YJR117W 1362 nt1.74□□□□□ -2.13
RPL40BP0CH09 NEL1YHR035W 1893 nt1.74□□□□□ -2.13
RPL40BP0CH09 YCL076WYCL076W 744 nt1.74□□□□□ -2.13
RPL40BP0CH09 YOS1YER074W-A 258 nt1.74□□□□□ -2.13
RPL40BP0CH09 YGL101WYGL101W 648 nt1.74□□□□□ -2.13
RPL40BP0CH09 QCR9YGR183C 201 nt1.74□□□□□ -2.13
RPL40BP0CH09 YGR242WYGR242W 309 nt1.74□□□□□ -2.13
RPL40BP0CH09 CSI1YMR025W 888 nt1.74□□□□□ -2.13
RPL40BP0CH09 YOR029WYOR029W 336 nt1.74□□□□□ -2.13
RPL40BP0CH09 YOR392WYOR392W 444 nt1.74□□□□□ -2.13
RPL40BP0CH09 PDR8YLR266C 2106 nt1.73□□□□□ -2.13
RPL40BP0CH09 ELG1YOR144C 2376 nt1.73□□□□□ -2.13
RPL40BP0CH09 YRB1YDR002W 606 nt1.73□□□□□ -2.13
RPL40BP0CH09 MCM21YDR318W 1107 nt1.73□□□□□ -2.13
RPL40BP0CH09 LRS4YDR439W 1044 nt1.73□□□□□ -2.13
RPL40BP0CH09 YEL009C-AYEL009C-A 408 nt1.73□□□□□ -2.13
RPL40BP0CH09 PET191YJR034W 327 nt1.73□□□□□ -2.13
RPL40BP0CH09 NEO1YIL048W 3456 nt1.73□□□□□ -2.13
RPL40BP0CH09 MPS1YDL028C 2295 nt1.73□□□□□ -2.13
RPL40BP0CH09 DSS1YMR287C 2910 nt1.73□□□□□ -2.13
RPL40BP0CH09 PEX5YDR244W 1839 nt1.73□□□□□ -2.13
RPL40BP0CH09 SHU2YDR078C 672 nt1.72□□□□□ -2.13
RPL40BP0CH09 YEL075CYEL075C 369 nt1.72□□□□□ -2.13
RPL40BP0CH09 PMI40YER003C 1290 nt1.72□□□□□ -2.13
RPL40BP0CH09 BAT1YHR208W 1182 nt1.72□□□□□ -2.13
RPL40BP0CH09 DUG3YNL191W 1074 nt1.72□□□□□ -2.13
RPL40BP0CH09 HSP10YOR020C 321 nt1.72□□□□□ -2.13
RPL40BP0CH09 HEM4YOR278W 828 nt1.72□□□□□ -2.13
RPL40BP0CH09 MBA1YBR185C 837 nt1.72□□□□□ -2.13
RPL40BP0CH09 YBR287WYBR287W 1284 nt1.72□□□□□ -2.13
RPL40BP0CH09 MSH6YDR097C 3729 nt1.72□□□□□ -2.13
RPL40BP0CH09 CTF13YMR094W 1437 nt1.72□□□□□ -2.13
RPL40BP0CH09 YML096WYML096W 1578 nt1.72□□□□□ -2.13
RPL40BP0CH09 MUS81YDR386W 1899 nt1.71□□□□□ -2.14
RPL40BP0CH09 ARF1YDL192W 546 nt1.71□□□□□ -2.14
RPL40BP0CH09 RTT102YGR275W 474 nt1.71□□□□□ -2.14
RPL40BP0CH09 AIM23YJL131C 1071 nt1.71□□□□□ -2.14
RPL40BP0CH09 MRPL24YMR193W 777 nt1.71□□□□□ -2.14
RPL40BP0CH09 TRM112YNR046W 408 nt1.71□□□□□ -2.14
RPL40BP0CH09 MUD1YBR119W 897 nt1.71□□□□□ -2.14
RPL40BP0CH09 YBR197CYBR197C 654 nt1.71□□□□□ -2.14
RPL40BP0CH09 ATP22YDR350C 2055 nt1.71□□□□□ -2.14
RPL40BP0CH09 TRM12YML005W 1389 nt1.71□□□□□ -2.14
RPL40BP0CH09 HMO1YDR174W 741 nt1.7□□□□□ -2.14
RPL40BP0CH09 YAR075WYAR075W 474 nt1.7□□□□□ -2.14
RPL40BP0CH09 COS1YNL336W 1146 nt1.7□□□□□ -2.14
RPL40BP0CH09 ATG34YOL083W 1239 nt1.7□□□□□ -2.14
RPL40BP0CH09 CAF20YOR276W 486 nt1.7□□□□□ -2.14
RPL40BP0CH09 SUR1YPL057C 1149 nt1.7□□□□□ -2.14
RPL40BP0CH09 YPL071CYPL071C 471 nt1.7□□□□□ -2.14
RPL40BP0CH09 MRP2YPR166C 348 nt1.7□□□□□ -2.14
RPL40BP0CH09 YRR1YOR162C 2433 nt1.7□□□□□ -2.14
RPL40BP0CH09 NAN1YPL126W 2691 nt1.7□□□□□ -2.14
RPL40BP0CH09 YMR045CYMR045C 5268 nt1.7□□□□□ -2.14
RPL40BP0CH09 CHC1YGL206C 4962 nt1.69□□□□□ -2.14
RPL40BP0CH09 STD1YOR047C 1335 nt1.69□□□□□ -2.14
RPL40BP0CH09 CLB5YPR120C 1308 nt1.69□□□□□ -2.14
RPL40BP0CH09 YOL057WYOL057W 2136 nt1.69□□□□□ -2.14
RPL40BP0CH09 IPT1YDR072C 1584 nt1.69□□□□□ -2.14
RPL40BP0CH09 SAS4YDR181C 1446 nt1.69□□□□□ -2.14
RPL40BP0CH09 GUK1YDR454C 564 nt1.69□□□□□ -2.14
RPL40BP0CH09 TIM9YEL020W-A 264 nt1.69□□□□□ -2.14
RPL40BP0CH09 RTT105YER104W 627 nt1.69□□□□□ -2.14
RPL40BP0CH09 SNX4YJL036W 1272 nt1.69□□□□□ -2.14
RPL40BP0CH09 NNT1YLR285W 786 nt1.69□□□□□ -2.14
RPL40BP0CH09 YNL046WYNL046W 519 nt1.69□□□□□ -2.14
RPL40BP0CH09 VPS8YAL002W 3825 nt1.69□□□□□ -2.14
RPL40BP0CH09 ENP2YGR145W 2124 nt1.69□□□□□ -2.14
RPL40BP0CH09 AFI1YOR129C 2682 nt1.68□□□□□ -2.14
RPL40BP0CH09 NUP145YGL092W 3954 nt1.68□□□□□ -2.14
RPL40BP0CH09 YFH1YDL120W 525 nt1.68□□□□□ -2.14
RPL40BP0CH09 YER066C-AYER066C-A 501 nt1.68□□□□□ -2.14
RPL40BP0CH09 COG2YGR120C 789 nt1.68□□□□□ -2.14
RPL40BP0CH09 EPT1YHR123W 1176 nt1.68□□□□□ -2.14
RPL40BP0CH09 TMA22YJR014W 597 nt1.68□□□□□ -2.14
RPL40BP0CH09 ADI1YMR009W 540 nt1.68□□□□□ -2.14
RPL40BP0CH09 COQ10YOL008W 624 nt1.68□□□□□ -2.14
RPL40BP0CH09 CDC31YOR257W 486 nt1.68□□□□□ -2.14
RPL40BP0CH09 YOR263CYOR263C 408 nt1.68□□□□□ -2.14
RPL40BP0CH09 YPL035CYPL035C 348 nt1.68□□□□□ -2.14
RPL40BP0CH09 ALY1YKR021W 2748 nt1.68□□□□□ -2.14
RPL40BP0CH09 MSH3YCR092C 3057 nt1.68□□□□□ -2.14
RPL40BP0CH09 AGC1YPR021C 2709 nt1.68□□□□□ -2.14
RPL40BP0CH09 PCL9YDL179W 915 nt1.67□□□□□ -2.14
RPL40BP0CH09 CTH1YDR151C 978 nt1.67□□□□□ -2.14
RPL40BP0CH09 YER068C-AYER068C-A 432 nt1.67□□□□□ -2.14
RPL40BP0CH09 YBL028CYBL028C 321 nt1.67□□□□□ -2.14
RPL40BP0CH09 SUB1YMR039C 879 nt1.67□□□□□ -2.14
RPL40BP0CH09 HMT1YBR034C 1047 nt1.67□□□□□ -2.14
RPL40BP0CH09 ARL1YBR164C 552 nt1.67□□□□□ -2.14
RPL40BP0CH09 ACA1YER045C 1470 nt1.67□□□□□ -2.14
RPL40BP0CH09 ANR2YKL047W 1551 nt1.67□□□□□ -2.14
RPL40BP0CH09 TRZ1YKR079C 2517 nt1.66□□□□□ -2.14
RPL40BP0CH09 RRP42YDL111C 798 nt1.66□□□□□ -2.14
RPL40BP0CH09 YDR355CYDR355C 303 nt1.66□□□□□ -2.14
RPL40BP0CH09 YJL015CYJL015C 285 nt1.66□□□□□ -2.14
RPL40BP0CH09 CWC24YLR323C 780 nt1.66□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 33.3 ms