Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBCP0CG48 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.19■□□□□ 0.5
UBCP0CG48 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBCP0CG48 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBCP0CG48 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
UBCP0CG48 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
UBCP0CG48 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBCP0CG48 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
UBCP0CG48 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBCP0CG48 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.19■□□□□ 0.5
UBCP0CG48 AC008764.7-201ENST00000593779 1081 ntBASIC18.19■□□□□ 0.5
UBCP0CG48 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBCP0CG48 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBCP0CG48 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
UBCP0CG48 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBCP0CG48 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBCP0CG48 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.18■□□□□ 0.5
UBCP0CG48 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBCP0CG48 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
UBCP0CG48 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBCP0CG48 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.18■□□□□ 0.5
UBCP0CG48 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
UBCP0CG48 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBCP0CG48 AC099791.1-201ENST00000416440 715 ntBASIC18.18■□□□□ 0.5
UBCP0CG48 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.18■□□□□ 0.5
UBCP0CG48 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.18■□□□□ 0.5
UBCP0CG48 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBCP0CG48 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UBCP0CG48 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.18■□□□□ 0.5
UBCP0CG48 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.18■□□□□ 0.5
UBCP0CG48 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBCP0CG48 TSPY26P-201ENST00000476365 1326 ntBASIC18.18■□□□□ 0.5
UBCP0CG48 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBCP0CG48 BX005040.4-201ENST00000637145 1518 ntBASIC18.18■□□□□ 0.5
UBCP0CG48 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.18■□□□□ 0.5
UBCP0CG48 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBCP0CG48 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBCP0CG48 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
UBCP0CG48 AP005212.1-201ENST00000581547 1997 ntBASIC18.17■□□□□ 0.5
UBCP0CG48 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.17■□□□□ 0.5
UBCP0CG48 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.17■□□□□ 0.5
UBCP0CG48 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
UBCP0CG48 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
UBCP0CG48 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBCP0CG48 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBCP0CG48 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.17■□□□□ 0.5
UBCP0CG48 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.17■□□□□ 0.5
UBCP0CG48 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
UBCP0CG48 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.17■□□□□ 0.5
UBCP0CG48 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBCP0CG48 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBCP0CG48 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.17■□□□□ 0.5
UBCP0CG48 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBCP0CG48 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
UBCP0CG48 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
UBCP0CG48 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.16■□□□□ 0.5
UBCP0CG48 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
UBCP0CG48 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBCP0CG48 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBCP0CG48 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
UBCP0CG48 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.16■□□□□ 0.5
UBCP0CG48 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.16■□□□□ 0.5
UBCP0CG48 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.16■□□□□ 0.5
UBCP0CG48 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.16■□□□□ 0.5
UBCP0CG48 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.16■□□□□ 0.5
UBCP0CG48 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.16■□□□□ 0.5
UBCP0CG48 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
UBCP0CG48 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.16■□□□□ 0.5
UBCP0CG48 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.16■□□□□ 0.5
UBCP0CG48 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
UBCP0CG48 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
UBCP0CG48 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.15■□□□□ 0.5
UBCP0CG48 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
UBCP0CG48 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.15■□□□□ 0.5
UBCP0CG48 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBCP0CG48 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBCP0CG48 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
UBCP0CG48 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
UBCP0CG48 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBCP0CG48 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.15■□□□□ 0.5
UBCP0CG48 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.15■□□□□ 0.5
UBCP0CG48 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBCP0CG48 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBCP0CG48 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms